Pseudoalteromonas sp. SD03: ABZP26_14800
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Entry
ABZP26_14800 CDS
T11365
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pssd Pseudoalteromonas sp. SD03
Pathway
pssd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pssd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZP26_14800 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pssd03019
]
ABZP26_14800 (groL)
03110 Chaperones and folding catalysts [BR:
pssd03110
]
ABZP26_14800 (groL)
03029 Mitochondrial biogenesis [BR:
pssd03029
]
ABZP26_14800 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pssd04147
]
ABZP26_14800 (groL)
Enzymes [BR:
pssd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABZP26_14800 (groL)
Messenger RNA biogenesis [BR:
pssd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABZP26_14800 (groL)
Chaperones and folding catalysts [BR:
pssd03110
]
Heat shock proteins
HSP60 / Chaperonin
ABZP26_14800 (groL)
Mitochondrial biogenesis [BR:
pssd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABZP26_14800 (groL)
Exosome [BR:
pssd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABZP26_14800 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABZP26_14800 (groL)
Exosomal proteins of breast cancer cells
ABZP26_14800 (groL)
Exosomal proteins of colorectal cancer cells
ABZP26_14800 (groL)
Exosomal proteins of bladder cancer cells
ABZP26_14800 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XDH87313
UniProt:
A0AB39APD5
LinkDB
All DBs
Position
1:3173040..3174686
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVLFAGDARAKMLTGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAIIAAVAELKALSVPCADTKAIAQVGTISANSDKEIGEIIADAMEKVGRNTGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINNAEKGAVELDNPFILLVDKKISNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATVEDLGTAKRVVITKDDTTIIDGAGEEDGINGRVAQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRAASKLADLLGDNEDQNHGIKVALRAMEAPLRQIVTNAGDEASVVINAVKGGEGNYGYN
AATGEYNDMIEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKEEAGAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtactgtttgcaggcgacgcacgtgcaaaaatgctaactggcgta
aatattctagcaaatgcagtaaaagtaacattaggccctaaaggtcgtaacgttgtatta
gacaaatcatttggctctcctgtgatcaccaaagatggtgtatctgtagcaaaagaaatc
gaacttgaagacaagtttgaaaatatgggcgcacaaatggttaaagaagtagcgtctaaa
gcaaatgatgctgctggtgacggtaccactaccgcaactgtgcttgctcagtctattgta
aacgaaggtcttaaagcggttgctgcgggtatgaacccaatggatcttaagcgcggtatt
gataaagcaatcattgctgcagttgcagaacttaaagcgctttctgttccatgtgctgat
actaaagcgattgcacaagtaggtactatttcagctaactctgataaagaaattggtgaa
atcattgctgatgcaatggaaaaagtaggccgtaacacaggtgttattacggttgaagaa
gggcaatcacttgaaaacgaattagatgttgtagaaggcatgcagtttgaccgtggttac
ttatctccatactttatcaacaacgctgaaaaaggcgcggttgagctagataacccattt
atcttacttgtagataaaaaaatatctaacatccgtgaattattaccaacattagaagcg
gttgctaaagcaagtaaacctctgctcatcatcgcagaagaccttgaaggtgaagcgtta
gcgacactagtagtgaataacatgcgtggtattgtaaaagtatcagcggttaaagcacct
ggttttggcgatcgccgtaaagcaatgctacaagatatcgcggtattaactggcggtact
gtgatttctgaagaaatcggccttgagcttgaaaaagcaacagttgaagacttagggaca
gctaaacgcgtagtaatcactaaagacgacacaacaatcattgatggtgctggtgaagaa
gacggtattaacggccgtgttgcacaaatcaaagcacaaattgaagaagcgacttcagac
tacgataaagaaaagctacaagagcgcatggctaaattagctggcggtgttgcagtaatc
aaagtaggtgccgctactgaaattgaaatgaaagagaaaaaagatcgtgttgaagatgca
ttacatgcaactcgcgcagcggttgaagaaggtgttgtaccaggtggcggtgttgcctta
gtgcgtgctgctagcaaattagcagatttactaggcgataacgaagaccaaaaccacggt
attaaagtggcacttcgcgcgatggaagcaccacttcgtcaaatcgttacaaacgcaggc
gacgaagcatctgttgttattaacgcagtgaaaggcggtgaaggtaactacggttacaac
gcagccactggcgaatacaacgacatgattgaaatgggtatcctagatccaacgaaagta
acccgttctgcattacaatttgcaggatcgattgccggtctaatgatcaccacagaagca
atggtcgctgaaattcctaaagaagaagcgggcgctcctgatatgggtggcatgggcgga
atgggtggtatgggcggcatgatgtaa
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