Pseudoxanthomonas sp. SE1: OY559_04425
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Entry
OY559_04425 CDS
T10619
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse02020
Two-component system
psse02040
Flagellar assembly
Brite
Transcription machinery [BR:
psse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OY559_04425
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Gene cluster
GFIT
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NCBI-ProteinID:
WFC42776
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Position
complement(976356..977789)
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AA seq
477 aa
AA seq
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MKPRLQTSLGQHLVMTPQLRQAIRLLQMSTAELEIELTEAVETNPLLDWTEADEEPAPTQ
GAEDDRPPEESPREAERDASDDRDDWSPDEGPWASSGGGSFDDEDGGSPAERVAEADTLH
GHLLWQLHLSHLSPRDRRIGATLIDALEEDGYLREPLSGIVQALRPDIEANEDDVLVVLH
QVQRFDPVGVAARTLGECLHLQLAVLSDDTPGKALALQIADTALERLPRSGVAGIAQEMK
RPVAEVDEAVQLLRTLDPKPGAQVGDLSHDTYVVPDCVVWRQRGVWRAALAGSTLPRIAI
HRGYEQMIRQCGDSDAGYLKAQLQEARWLLKSVEARGETLLKVMRCLLHQQAGFLEFGEQ
ALRPLTLRDVAEEVGLHESTVSRAIARKYVRTPRGTLPMRAFFASGIDTEGGGEASSTAI
QAMIRRLVDAENPRKPLSDAKLADLLKASGIPVARRTVAKYREALNILSSHERVRIA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagccacgcctgcagacatcgctgggacaacatctggtcatgacgccccagttgcgt
caggccatccggctgttgcagatgtccaccgccgagctcgagatcgagttgaccgaggcc
gtggagaccaaccccctgctcgactggaccgaggccgacgaagaacccgcgcccacgcag
ggcgccgaggacgaccgcccgcccgaagaaagccccagggaagccgaacgcgacgcctcc
gacgatcgcgacgactggtcgccggatgaaggcccgtgggcctcctcgggcggtggctcg
ttcgacgacgaagacggcggcagtccggccgaacgcgtggccgaagccgatacgctgcac
ggccacctgctgtggcaactgcacctgtcgcatctctccccacgcgaccgccgcatcggt
gccacgctgatcgatgcgttggaagaagacggctacctgcgcgaaccgctgtccggcatc
gtgcaggcgctgcgtcctgacatcgaggcgaacgaggacgatgtcctcgtcgtcctgcac
caggtgcagcgcttcgacccggtgggcgtggcagcccggacgctcggcgaatgcctgcat
ctgcaattggccgtgctgagcgacgacacgccgggcaaggcgctggccctgcagatcgcc
gacacggccctggagcgcctgccgcgtagtggcgtggccggcatcgcccaggagatgaag
cgaccggtcgccgaggtggacgaggccgtgcaattgttgcgcacgctcgatccaaaaccc
ggggcgcaggtcggcgacctctcgcatgacacctacgtggtgccggactgcgtggtctgg
cgccagcggggcgtctggcgcgccgcgctcgcgggcagcacgctgccgcgcatcgcgatc
catcgcggttacgaacagatgatccggcaatgcggcgacagcgatgccggctacctgaag
gcgcaactgcaggaagcccgctggctgctgaaaagcgtggaagcacgcggcgagaccctg
ctcaaggtcatgcgctgcctgctgcaccagcaggccggcttcctggaattcggcgagcag
gcactgcgcccactgacgctgcgcgacgtggccgaagaagtgggcctgcacgaatccacc
gtgtcgcgcgccatcgcgcgcaagtatgtacgcaccccgcgcggcaccctgcccatgcgc
gccttcttcgcctccggcatcgacacggaaggcggcggcgaagcatccagcaccgccatc
caggcgatgatccgccggctggtcgatgccgagaatccccgcaagccgctgtccgacgca
aaactcgcggacctgctcaaggcatccggcattccggtggcacggcgcaccgtggccaag
taccgcgaagcactgaacatcctctcttcgcacgagcgcgtgcgcatcgcctga
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