Pseudoxanthomonas sp. SE1: OY559_04895
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Entry
OY559_04895 CDS
T10619
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psse Pseudoxanthomonas sp. SE1
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psse03016
]
OY559_04895 (miaB)
Enzymes [BR:
psse01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
OY559_04895 (miaB)
Transfer RNA biogenesis [BR:
psse03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
OY559_04895 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WFC42861
LinkDB
All DBs
Position
complement(1072326..1073762)
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AA seq
478 aa
AA seq
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MTGTQAPALPTTAGPAVTDPALVPLPVGRPRAPDQVRGKLYIKTHGCQMNEYDSAKMADV
LAASDGLELTDNPEEADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGRDVIIGVGGCVA
SQEGEAIVKRAPYVDLVFGPQTLHRLPELIRARREQNKPQVDISFPEIEKFDRLPEPRAE
GPSAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNA
YRGPYGDGEIADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLVDAYRDVPQLANFLHLP
VQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLI
EDVGFDQSFSFIYSRRPGTPAADLEDDTPDAVKHARLDRLQQHINAYAAGISQRMVGTVQ
SVLVEGPSKKNPNELTGKTENMRSVNFPGHPRLVGQFVDVVITEALSNSLRGRVAGAD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggacgcaagcccctgcactgccgaccacggccggccccgccgtgaccgacccc
gccctcgttccgctgcccgtcggtcgcccccgtgcgcccgatcaggtccgcgggaagctg
tacatcaagacccacgggtgccagatgaacgagtacgactcggccaagatggccgacgtg
ctcgccgcgtccgacggactggagttgaccgacaaccccgaggaagccgacgtggtgctg
gtcaacacctgctccatccgcgagaaggcgcaggaaaaggtcttcagccagctcggccgg
tggaaggcactgaaggccggcggccgcgacgtcatcatcggcgtgggcggctgcgtggcc
tcccaggaaggcgaagccatcgtcaagcgcgcgccctacgtcgacctggtgttcggcccg
cagaccctgcatcgcctgccggagctgatccgcgcgcgtcgcgagcagaacaagccccag
gtcgacatcagcttccccgagatcgagaagttcgaccgcctgcccgagccgcgcgccgaa
ggcccctcggcgttcgtgtcgatcatggaaggctgctcgaaatactgctcgttctgcgtg
gtgccctacacccgcggcaccgaggtcagccggccgttcgaggatgtgctggtggaagtg
gcgcagctggcggcgcagggcgtgcgcgagatcaacctgctgggccagaacgtcaacgcg
tatcgtggcccttatggtgatggcgagatcgccgacctgggcctgctgatccgcaccatc
gccgagatcgacggcgtcgggcgcatacgcttcaccacctcgcacccgctggagttcagc
gactcgctggtggacgcctaccgcgacgtgccgcagttggccaatttcctgcacctgccc
gtgcaggccggcagcgaccgcatcctctctgcgatgaagcgcggctacaccgcgctcgag
ttcaagcagaagatccgcaagctgcgcgcggtacgcccggacatctcgatcagctcggac
ttcatcgtcggcttcccgggcgaaaccgatgccgatttcgagaagacgatgaagctgatc
gaggacgtgggcttcgaccagagtttctccttcatctactcgcgccgccccggcacaccg
gcggccgacctggaagacgacacgccggacgccgtgaagcacgcgcgcctggaccgcctg
cagcagcacatcaacgcctacgccgcagggatctcgcagcggatggtgggcacggtgcag
tcggtgctggtggaggggccttcgaagaaaaatccgaacgagttgaccggcaagaccgag
aacatgcgctcggtgaacttccccggccatccgcgcctggtgggccagttcgtcgacgtg
gtgatcaccgaggcgctgagcaactccctgcgcggacgcgtcgccggcgccgactga
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