Pseudoxanthomonas sp. SE1: OY559_05030
Help
Entry
OY559_05030 CDS
T10619
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OY559_05030 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psse03400
]
OY559_05030 (uvrB)
DNA repair and recombination proteins [BR:
psse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OY559_05030 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OY559_05030 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
WFC42887
LinkDB
All DBs
Position
1098413..1100434
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPRAIERLVQNFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLAATKTLLSRPDALVVATVSAIYGLGAPEDYLSLRLILSLGERIDQRELIRHLTQLQ
YTRNEYELQRGTFRVRGEIIDVHPAESDAEAVRIELFDGEVEGLSLFDPLTGESLRKLQR
YTVYPKTHYATTRERVLAAIDTIKIELKDRLEQLYAQNKLVEAQRLAQRTQFDVEMMAEV
GFCSGIENYSRHLTGKAPGEPPPTLFDYLPADALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESNGEIVELVVRPTGLID
PEVEIRPVGTQVDDLLSQINERVSWGDRVLVTTLTKRMAENLTEYLGEHGVKVRYLHSDV
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADRMTRSMQAAIDETGRRREKQVEYNLEHGITPKSVARPIVDILEGA
RSEAAGEGKAGRGKSRRVAEEPAEYGVMDPAKAVARIKVLEQQMYQHARDLEFEDAARLR
DQIQRLKEASLGG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgtttccagcttgtttctccgtattcccccgccggtgaccagccgcgggcc
atcgagaggctcgtgcagaacttcgaggcgggattggcgaagcagaccctgctgggcgtg
acggggtccggcaagacgtacaccatcgccaacgtggtccagcaggtgcagaagccgacc
ctggtgatggcgccgaacaagacgttggccgcgcagctgtatggcgaattcaaggccttt
ttcccgcacaacgcggtggagtatttcgtcagctattacgactactaccagcccgaagcc
tacgtgccgtccagcgataccttcatcgagaaggacagctcgatcaacgagcacatcgaa
cagatgcgattggcggcgaccaagaccctgctgtcccggccagatgcgctggtggtggcg
acggtgtccgcgatctacggcctgggtgcgcccgaggactacctgtcgctgcgcctgatc
ctgtcgctgggcgaacgcatcgaccagcgcgaattgatccgtcacctgacccagttgcag
tacacccgcaacgagtacgaactgcagcgcggcacgttccgcgtgcgcggcgagatcatc
gacgtgcatccggcggaaagcgatgccgaggcagtgcgcatcgaactgttcgatggcgag
gtggagggcctgagcctgttcgacccgctcacgggcgaatcgctgcgcaagctgcagcgc
tatacggtttacccgaagacgcactacgccaccacgcgcgagcgtgtgctggccgccatc
gataccatcaagatcgagctgaaggaccgtctggagcagctctacgcgcagaacaaactg
gttgaagcgcagcggctggcccagcggacgcagttcgacgtggaaatgatggcggaagtc
ggcttctgttccggcatcgagaactactcgcgccacctgaccggcaaggcgcccggcgaa
ccgccgccgaccctgttcgactacctgccggccgatgcgctgctggtgatcgacgaatcg
cacgtgaccattccgcagatcggcgccatgtacaagggcgaccggtcgcgcaaggaaacg
ctggtggagttcgggttccgcctgccgtctgcgctggacaaccggccgctgcgtttcgag
gaatgggaggcccgttcgccccgcagcatctatgtttcggcgacacccggcccttacgag
ttgcgtgaatccaacggcgagatcgtggaactggtggttcgccccaccggcctgatcgat
cctgaagtcgaaatccgtccggtcggcacgcaggtggacgacctgctgtcgcagatcaac
gagcgtgtgtcctggggcgaccgcgtgctggtgaccacgctgaccaagcgcatggcggag
aacctgaccgagtatctgggcgagcacggggtgaaggtgcgctacctgcactcggacgtc
gatacggtcgaacgggtagagatcatccgcgacctgcgcctgggcaagttcgatgtgctg
gtcggcatcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtcgcgatc
ctggacgcggacaaggagggcttcctgcgctccaccggctcgctgatccagaccatcggc
cgagccgcgcgcaatctgcgcggcaaggcgatcctgtatgccgaccgcatgacccggtcg
atgcaggccgccatagacgaaaccggccggcgccgtgagaaacaggtggaatacaacctc
gaacacggcatcacgccgaagtcggtggcgcgccccatcgtcgacattctggagggcgcg
cgcagcgaggcggccggcgagggcaaggcgggaaggggcaaatcgcgccgggtggccgag
gagcctgccgagtacggggtgatggatccggccaaggcggtcgctcgcatcaaggtgttg
gagcagcagatgtaccagcacgcccgtgacctggaattcgaagatgcggcgcgccttcgc
gaccagatccagcggctgaaggaagccagcctgggcggctga
DBGET
integrated database retrieval system
