KEGG   Pseudoxanthomonas sp. SE1: OY559_07160
Entry
OY559_07160       CDS       T10619                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psse  Pseudoxanthomonas sp. SE1
Pathway
psse03030  DNA replication
psse03430  Mismatch repair
psse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OY559_07160 (dnaQ)
   03430 Mismatch repair
    OY559_07160 (dnaQ)
   03440 Homologous recombination
    OY559_07160 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psse03032]
    OY559_07160 (dnaQ)
   03400 DNA repair and recombination proteins [BR:psse03400]
    OY559_07160 (dnaQ)
Enzymes [BR:psse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OY559_07160 (dnaQ)
DNA replication proteins [BR:psse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OY559_07160 (dnaQ)
DNA repair and recombination proteins [BR:psse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OY559_07160 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WFC43279
LinkDB
Position
1510452..1511180
AA seq 242 aa
MRQIILDTETTGLEWKKGNRVVEIGCVELLERRPTGRTYHQYINPQREFEQGAAEVTGLS
LEFLSDKPLFAAIADEFLAFIDGAELVIHNAAFDVGFLDYELSRLGEHYGRLADRVTVED
SLLLARQRYPGQRNSLDALCKRLGVDNTHRQLHGALLDAQLLCDVYLNLTAGQSEIGFGG
AEDAAPGTSTTVVHQFDSAVAGARPRVSPTVDELAAHEARLATLRKKAGGRCLWDPPVFE
AG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgccagatcatcctagacaccgaaaccaccggcctggaatggaagaaaggcaaccgg
gtggtcgaaatcggctgcgtggaattgctggaacgcaggcctaccgggcgtacgtaccat
caatacatcaacccgcagcgcgaattcgagcagggggcggcggaagtcaccgggctcagc
ctggagttcctgtccgacaagccgctcttcgccgccatcgcggacgaattcctggccttc
atcgacggtgcggagctggtgatccacaacgccgccttcgacgtggggttcctggattac
gagttgtcgcgactgggtgagcactatggtcgcctggccgaccgtgtcaccgtcgaggac
tcgctgctgctggcgcggcagcgctatcccggccagcgcaactcgctggacgcgctgtgc
aagcggctgggcgtggacaacacccaccgtcagctgcacggcgccctgctggacgcccaa
ctgttgtgcgacgtgtacctgaacctcaccgccggccagagcgaaatcggattcggggga
gcggaagacgcagcgcccggaacctccacgacggtggtgcaccagttcgattcagccgtt
gccggcgcacgtcctcgcgtgtcgcccacggtggacgaactggccgcgcacgaagcgcgc
ctggcgacattgcggaagaaggcgggtggccggtgcctgtgggatccgccggtgttcgag
gccggctga

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