Pseudoxanthomonas sp. SE1: OY559_09405
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Entry
OY559_09405 CDS
T10619
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse00061
Fatty acid biosynthesis
psse00071
Fatty acid degradation
psse01100
Metabolic pathways
psse01212
Fatty acid metabolism
psse02024
Quorum sensing
psse04146
Peroxisome
Module
psse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OY559_09405
00071 Fatty acid degradation
OY559_09405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OY559_09405
09145 Cellular community - prokaryotes
02024 Quorum sensing
OY559_09405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psse01004
]
OY559_09405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psse04147
]
OY559_09405
Enzymes [BR:
psse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OY559_09405
Lipid biosynthesis proteins [BR:
psse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OY559_09405
Exosome [BR:
psse04147
]
Exosomal proteins
Exosomal proteins of breast milk
OY559_09405
Exosomal proteins of breast cancer cells
OY559_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_tail_terminator
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WFC43690
LinkDB
All DBs
Position
complement(1994110..1995789)
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AA seq
559 aa
AA seq
DB search
MSQERPWFKSYPQGVPQEVDLEQYRSIVSVFDEAISKYRDRPAFRNFGKTLTYGEIDKLS
RQFAAYLLGELKLKKGDRVAIMMPNCLQYPIAIFGVLRAGLTVVNVNPMYTPRELKHQLV
DSGASVLLVVDNFGKTAQEALAGTQVRQVVTTALGDLVGFPKGAIVNFVLKYVKKMVPDY
DIPGTVRFKDTLTLGQLHTLPEVDIDSGDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
GVWVGTGLDYGNEVIITALPLYHIFALTANCLVFMKLGGLNHLITNPRDMPGFVKELKAT
RFTAITGVNTLFNGLLNTPGFDEVDFSNLKMTLGGGMAVQRAVAEKWKKVTGVTLVEAYG
LTETSPAACINPMNLHDYNGAIGLPVPSTDACLKDDDGNIVPVGEVGELCIKGPQVMKGY
WQRPEETANVMDADGWLHTGDMAKMDENGFFYIVDRKKDMILVSGFNVYPNEVEDVIAGL
EGVLEVAAIGVPDDKSGEAVKVFIVKKNPDLTVDQVKAYCRDNLTGYKQPRHIEFRTELP
KTNVGKILRKELREPSKAS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggaacgtccgtggttcaagagttatccgcaaggcgtgccgcaggaagtggac
ctggagcagtaccgctccatcgtgtccgtcttcgatgaggcgatcagcaagtaccgcgac
cgccccgcgttccgcaacttcggcaagaccctgacctacggcgagatcgacaagctcagc
cgccagttcgcggcctacctgctcggcgaactgaagctcaagaagggcgaccgcgtcgcc
atcatgatgccgaactgcctgcaataccccatcgccatcttcggcgtgcttcgcgcagga
ctgacggtcgtcaacgtcaatccgatgtacaccccgcgcgaactgaagcaccagttggtc
gattccggcgcgagcgtgctgctggtggtcgacaacttcggcaagaccgcacaggaggcc
ctcgcgggcacgcaggtcaggcaggtcgtcaccacggcgctgggcgacctggtcggtttc
cccaagggggccatcgtcaacttcgtgctgaagtacgtgaagaagatggtgccggattac
gacatccccggcaccgtgcggttcaaggacacgttgacactcgggcagttgcatacgctg
cccgaggtcgacatcgattccggcgacatcgccttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgcgatgctcacgcaccgcaacctcgtggccaacatgcagcaggcc
ggggtgtgggtcggaaccggcctggactacggcaacgaagtgatcatcaccgcgttgccg
ctgtaccacattttcgcgctgacggcgaactgcctggtcttcatgaagctcggcggactg
aaccacctgatcacgaatccgcgcgacatgccgggcttcgtgaaggaactcaaggccacc
cgcttcaccgcgattaccggcgtcaacacgctgttcaatggcctgctcaatacgcccggt
ttcgatgaagtcgatttttccaatctcaagatgacgctcggcggcggcatggccgtgcag
cgtgcggtggcggagaaatggaagaaggtcaccggcgtgacgctggtcgaggcctacggg
ctgaccgagacgtcgcctgcggcctgcatcaacccgatgaacctgcacgactacaacggc
gccatcggcctgccggtgccctcgaccgatgcctgcctgaaggacgacgatggcaacatc
gtgcctgtcggcgaggtcggcgaactgtgcatcaagggcccgcaggtgatgaagggctac
tggcagcgccccgaggaaaccgcgaacgtcatggacgccgatggctggctgcataccggc
gacatggcgaagatggacgagaacggcttcttctacatcgtcgaccgcaagaaggacatg
atcctggtctccggcttcaacgtgtatccgaatgaggtcgaggacgtcatcgccggcctg
gaaggagtgcttgaagtcgccgcgatcggcgtgccggacgacaagtcgggtgaagccgtg
aaggtcttcatcgtgaagaagaatcccgacctcaccgtcgatcaagtgaaggcctactgc
cgcgacaacctgaccggctacaagcaaccacgccacatcgagttccgcacggagctgccc
aagaccaacgtcggcaagatcctgcgcaaggaattgcgggagccctccaaggcatcctga
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