Pseudoxanthomonas sp. SE1: OY559_10970
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Entry
OY559_10970 CDS
T10619
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
psse Pseudoxanthomonas sp. SE1
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psse03009
]
OY559_10970
Enzymes [BR:
psse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
OY559_10970
Ribosome biogenesis [BR:
psse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OY559_10970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
WFC40363
LinkDB
All DBs
Position
complement(2316056..2317054)
Genome browser
AA seq
332 aa
AA seq
DB search
MNASNPSPPSDKPAAGAKSAVRTVTVPEDRGGQRLDNFLLGQLKGAPRSLVYKLVRSGQV
RVNGGRAKAERKLEGGDEVRIPPVSLADVGDKATPPAGFLKRMEAAIVFEDERLLVINKP
TGVASHGGSGISHGAIETMRALRPHQSLELVHRLDRDTSGLLVMAKKRSALSELQALLRE
DSEDGTRAIEKRYLTLLVGRMPDGVMSVDAPLHIGLRQGGERHVQVHRDGKASLSHFRVL
ERRGGHSFCEVRIETGRTHQIRVHAQHIGHPVAGDDKYGDPAVNKRLREQAGLKRLFLHA
ASLQFALDGGRTPYVLSAPLSEDLAEALERLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttccaaccccagccccccctccgacaagccggcagcgggtgccaagagcgcc
gtgcggacggtcacggtgccggaggaccgcggtgggcagcggctggacaacttcctgctg
ggtcagctgaaaggcgcgcctcgcagtctggtctacaagctggtgcggagcggccaggtg
cgggtgaatggcggtcgggccaaggccgagcgcaagctggagggtggggacgaggtgcgt
attccgccggtcagtctcgcggatgtcggagacaaggcgacgccaccggcgggcttcctg
aagcggatggaggcggccatcgtcttcgaggacgagcggctgctggtcatcaacaagccc
accggtgtggccagccacggcggcagcggcatcagccatggcgccatcgagaccatgcgc
gcgctccggccccaccagtccttggaactggtgcaccggctggaccgcgacacctccggc
ctgctggtgatggctaagaagcgctcggcgctgtccgaactgcaggcgttgctgcgcgag
gacagcgaggacggcacccgtgccatcgagaagcgctacctgacgctgctggtcggccgc
atgcccgatggggtgatgagcgtggacgcgccgctgcacattggcctgcgccagggcggt
gagcggcacgtgcaggtgcaccgcgacggcaaggcgtcgttgagccacttccgcgtgctg
gaacggcggggagggcattcgttctgcgaagtgcgcatcgagaccggccgcacccaccag
atccgcgtgcacgcgcagcacatcggtcatccggtggcgggcgacgacaagtacggcgat
ccggccgtcaacaagcgcctgcgtgagcaggcaggcctgaagcgcctgttcctgcatgcc
gcgtcgctgcagttcgcgctggacggcggcaggacgccttacgtgctcagtgcgccgctg
tccgaggatcttgccgaggcactggaacggcttggctga
DBGET
integrated database retrieval system
