Pseudoxanthomonas sp. SE1: OY559_11960
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Entry
OY559_11960 CDS
T10619
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse00541
Biosynthesis of various nucleotide sugars
psse01100
Metabolic pathways
psse01250
Biosynthesis of nucleotide sugars
Module
psse_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OY559_11960 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psse01005
]
OY559_11960 (kdsB)
Enzymes [BR:
psse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
OY559_11960 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
psse01005
]
Lipid A
OY559_11960 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
WFC40537
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All DBs
Position
complement(2542287..2543051)
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AA seq
254 aa
AA seq
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MTDFIVAIPARYAASRLPGKPLRLLGGTPLVVHVARRALAAGAREVWVATDDARIRDALQ
ATEVRVAMTSERHASGSDRLAECADIAGWADDALVVNLQGDEPFAPPAGIRAVADTLAYT
GAEMATLAVPIDDAATLFDPNAVKLVRAANGDALYFSRAPIPWHRDAFAQSRDALPAGQW
LRHIGIYAYRAGFLRRFSQMPPGRLEQVESLEQLRALEGGHRIAVALTPEPFPPGVDTPE
DLARAESILRGVDQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcatcgtcgccattcccgcccgctatgccgcgtcgcggctgcccggcaaa
ccgctgcgcctcctcggcggcacgccactggtcgtccatgtggcgcgccgcgcgctggcc
gccggtgcgcgggaagtctgggttgccacggacgatgcccgcatccgcgacgcattgcag
gccaccgaggtgcgcgtggcgatgacatccgaacggcatgcctcgggcagcgaccgcctc
gcggagtgtgccgacatcgccggctgggccgacgatgcgctggtggtgaatctgcagggc
gacgaaccgttcgcgccgcccgccggcatccgggcggttgccgacacactggcgtacacc
ggcgcggagatggcgacgctggcagtacccatcgacgatgctgccacgctgttcgatccg
aatgcggtcaagctggtgcgtgccgccaatggcgatgcgctgtatttcagccgcgctccg
atcccctggcaccgcgatgccttcgcgcagtcgcgcgacgcgcttcctgccggtcagtgg
ctgcgccacatcggcatctacgcctatcgcgccggcttcctgcgccggttttcgcagatg
ccgcccggccggcttgaacaggtcgagtcgctggagcagttgcgggccctcgaaggcggg
caccggatcgccgtggcgctgacgcccgagccgtttccgcccggcgtggacacccccgaa
gaccttgcccgcgcggagtccatcctgcggggcgtggaccagtga
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