Pseudoxanthomonas sp. SE1: OY559_12580
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Entry
OY559_12580 CDS
T10619
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psse Pseudoxanthomonas sp. SE1
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psse03016
]
OY559_12580 (truB)
Enzymes [BR:
psse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OY559_12580 (truB)
Transfer RNA biogenesis [BR:
psse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OY559_12580 (truB)
Prokaryotic type
OY559_12580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WFC40650
LinkDB
All DBs
Position
complement(2662895..2663848)
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AA seq
317 aa
AA seq
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MSPPKLKFRSLDGLLLLDKPQGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFG
EATKIAGLLLGSSKAYDTVAVLGVTTDTDDADGATLRERPVPVLDAATVKAALVPLTGRI
RQRAPIYSALKQGGEPLYTKARRGDVIEAPERDVDVHAIEVLEIAPGRLSLRVECGSGTY
VRSLVRDLGEALGCGAHVAELRRLWVDPFRQPRMYSRDALQALAEQGGEAALEACLLPIE
AGLAGFPRVDVDAVDARRLAQGQKLRGHPPSDGPVAIHGQEGRVLGLGTVGPDGTLSPQR
LFAWAVAGTATKAGNTQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgaagctcaagttccgttcgctggatggcctgctgctgctggacaagccg
caggggatgagttcgaacgccgcactccaggtcgcacgccggctgttccgggcagagaag
ggcgggcataccggcagcctcgatccgctcgccactggcctgctgccactgtgcttcggt
gaggcgaccaagatcgccggcctgttgctgggatcctccaaggcctacgacacggtcgcc
gtgctgggtgtcaccaccgataccgacgatgccgacggtgcgacgctgcgcgagcggccg
gtgccggtgctggatgccgccaccgtcaaggccgcgctggtgcccctgacagggcgcatc
cgccagcgggccccgatctattcggcgctcaagcagggcggcgagccgctctacaccaag
gcccgccgcggagacgtcatcgaggcgcccgagcgtgatgtcgacgtccacgccatcgag
gtgctcgagatcgccccgggccggctttccctgcgcgtggagtgcggttcgggcacctat
gtgcgcagcctggtccgtgatctgggcgaggcgctgggctgtggtgcccacgtggccgaa
ctgcgtcgtctctgggtcgatccgttcaggcagccacgcatgtattcacgggacgcgctg
caggcgttggctgaacagggtggagaagccgccctcgaggcgtgcctgctgcccatcgag
gccggcttggccggcttcccgcgcgtggatgtcgacgccgtcgatgcgcgccggctcgcg
cagggccagaagctgcgcggacatccccccagcgacggcccggtcgcgatccacgggcag
gaaggccgggtcctggggctgggtacggtcggccccgatggcacgctatcgccgcagcga
ttgttcgcctgggccgtagccggtaccgccaccaaggccggcaacactcaataa
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