Pseudoxanthomonas sp. SE1: OY559_14670
Help
Entry
OY559_14670 CDS
T10619
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OY559_14670 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psse03021
]
OY559_14670 (rpoA)
03400 DNA repair and recombination proteins [BR:
psse03400
]
OY559_14670 (rpoA)
Enzymes [BR:
psse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OY559_14670 (rpoA)
Transcription machinery [BR:
psse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OY559_14670 (rpoA)
DNA repair and recombination proteins [BR:
psse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OY559_14670 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WFC41035
LinkDB
All DBs
Position
complement(3113403..3114401)
Genome browser
AA seq
332 aa
AA seq
DB search
MTGITQQVLRPRGPQIERLSGNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYSTIEGMQEDVLEVLLNLKDVAIRIHSGDSSTLSLAKQGPGVVTAGDIKTDHN
VEILNPELVICNLTKDTALNMRLKIERGFGYQPAAARRRPDEETRAIGRLVLDASFSPVR
RVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
PKQAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtattactcagcaagtgctgcgcccccgcggcccgcagatcgagcgcctgagc
ggcaatcgcgcgaaagtggtcatcgagccgctggagcgtggttacggtcatacgctcggc
aatgcgttgcgccgcgtgctgctgtcgtcgattcccggcttcgcgatcaccgaagtcgag
atcgatggcgtgctgcacgaatacagcaccatcgaaggcatgcaggaagacgtgctggaa
gtgctgttgaacctgaaggatgtggccatccgcatccacagcggcgactcgtccacgctc
agcctggccaagcagggcccgggcgtggtcaccgccggcgacatcaagaccgaccacaac
gtcgagatcctcaatccggaactggtcatctgcaacctgaccaaggacacggcgctgaac
atgcgcctgaagatcgagcgtggtttcggttaccagccggccgccgcgcgccgtcgtccg
gatgaagaaacccgtgcgatcggtcgcctggtgctggacgcctcgttctcgccggtccgt
cgcgtcgcgtacgcggtggaagccgcgcgcgtcgagcagcgcaccgacctggacaagctg
gtcctggacatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggcgacttcacgcaccgcgaccgcggcgcg
ccgaagcaggcggccagcggcgtggacccggtgctgctgcgcccgatcgacgatctggag
ctgacggtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgacctg
atccagaagacggaagtcgaactgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtcttggcgcagcgcggcctgtccctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgctcggctga
DBGET
integrated database retrieval system
