Pseudoxanthomonas sp. SE1: OY559_15515
Help
Entry
OY559_15515 CDS
T10619
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OY559_15515 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psse03019
]
OY559_15515 (recQ)
03400 DNA repair and recombination proteins [BR:
psse03400
]
OY559_15515 (recQ)
Enzymes [BR:
psse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OY559_15515 (recQ)
Messenger RNA biogenesis [BR:
psse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OY559_15515 (recQ)
DNA repair and recombination proteins [BR:
psse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OY559_15515 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
WFC41188
LinkDB
All DBs
Position
3275278..3277071
Genome browser
AA seq
597 aa
AA seq
DB search
MSSPALETLQRVFGYSAFRGHQQAIVEHLAAGHDALVLMPTGAGKSLCYQVPALLREGTG
IVVSPLIALMQDQVDALRQLGVRAAFLNSSLEAAEAVQVEQALLNGELDLLYVAPERLLT
GRFLSLLDRSRIALFAIDEAHCVSAWGHDFRREYLELALLHERWPDVPRIALTATADPPT
QREIAERLNLVDAEKFVSSFDRPNIRYTVVQKDNARHQLRDMLRKHKGEAGIVYCLSRKR
VEQFADYLAEQGFNALPYHAGLDAGVRAHNQRRFLREDGIVMVATIAFGMGIDKPDVRFV
AHMDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEAGEERKRLERRK
LDQLLGYCESTQCRRQVLLAGFGETYPHECGNCDNCLSPAETWDATEAAQKALSCVYRSG
QRFGVNHVIDVLRGSQSERIQQCGHEHLTTYGIGKDLDATTWRSVFRQLVACGLLEVEAE
FGSLRLTEGSRAVLRGERRLQLRKEQRERRERDRGPRSGLAVEAADLPRFQLLRDLRAQL
AREQNVPAYVIFHDSTLRNIAELQPATLDELGRVGGIGGAKLERYGQRVLEALATAG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccccgccctcgaaacactgcagcgcgtcttcggttacagcgccttccgcggt
caccagcaggccatcgtcgaacacctcgccgccggccacgacgccctggtgctcatgccc
acgggcgccggcaagtcgttgtgctaccaggtgcccgcgctgctgcgcgaaggcaccggc
atcgtcgtctcgccgctgatcgcgctgatgcaggaccaggtggacgcgctgcgccaactg
ggtgtgcgcgccgcattcctgaactcctcgctggaggccgccgaagccgtgcaggtcgaa
caggcgctgctcaatggcgaactggacctgctgtacgtggcgccggaacgcctgctgacc
ggccgcttcctgtcactgctggaccgcagccggatcgccctgttcgccatcgacgaggcg
cactgcgtctccgcctggggtcacgacttccgccgcgaatacctggaactggccctgctg
cacgaacgctggccggacgtgccacgcatcgcattgaccgccaccgccgacccgcccacc
cagcgcgagatcgccgagcggctgaacctggtggacgccgagaagttcgtcagctcgttc
gaccgccccaacatccgctacaccgtggtgcagaaggacaacgcccggcaccagctgcgc
gacatgctgcgcaagcacaagggcgaggccggcatcgtctactgcctgtcgcgcaagcgg
gtcgagcagttcgccgactacctggccgaacaaggcttcaatgcgctgccctaccacgcc
gggctggatgccggcgtgcgcgcgcacaaccaacgccgcttcctgcgcgaggacggcatc
gtcatggtggcgacgatcgctttcggcatgggcatcgacaagccggacgtgcgcttcgtc
gcgcacatggacctgcccaaatcgatggagggctactaccaggaaaccggccgcgccggc
cgcgatggcgaggccgccgaagcgtggctctgctacgggcttggcgacgtggtgctgctg
aaacagatgatcgagcagtccgaggctggcgaggagcgcaagcggctggagcggcgcaag
ctggaccagttgctgggttactgcgaatccacccagtgccggcgccaggtgctgctggcc
ggcttcggcgaaacctatccgcacgagtgcggcaactgcgacaactgcctcagcccggcc
gagacctgggatgccaccgaggcggcccagaaggcgctgagctgcgtgtaccgcagcggc
cagcgcttcggcgtgaaccacgtgatcgacgtgctgcgcggcagccagagcgagcgcatc
cagcagtgcggccacgaacacctgaccacctacggcatcggcaaggacctggacgcgacc
acctggcgcagcgtgttccgccaactggtggcctgcggcctgctggaagtggaggcagag
ttcggcagcctgcgcctgaccgagggcagccgcgccgtgctgcggggtgagcggcgcctg
cagcttcgcaaggaacagcgcgagcgccgcgagcgggatcgaggcccccgcagcgggctg
gcggtcgaggccgccgacctgccgcgcttccagctgttgcgcgacctgcgcgcgcagctg
gcgcgcgagcagaatgtgccggcctacgtgatcttccacgacagcaccctgcgcaacatc
gccgaactgcagcccgccaccctggacgaactgggccgggtgggcggcatcggcggcgcc
aagctggagcgttatgggcagcgcgtgctggaggcgctggcgacggccggctga
DBGET
integrated database retrieval system
