Pseudoxanthomonas sp. SE1: OY559_18735
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Entry
OY559_18735 CDS
T10619
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse03018
RNA degradation
Brite
Enzymes [BR:
psse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OY559_18735 (rhlB)
Messenger RNA biogenesis [BR:
psse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OY559_18735 (rhlB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WFC41774
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Position
complement(3987723..3989408)
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AA seq
561 aa
AA seq
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MSDKPLTDITFSSFDLHPALLAGLEAAGFSRCTPIQAMTLPVALAGRDVAGQAQTGTGKT
LAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG
GVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEMCVLDEADRMFDLGFIKDI
RFLLRRMPERTTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETEFITAAKVRQKLYYPA
DEEKIPLLIGLLSRSEGARTMVFVNTKAFVERVARALERAGYRVGVLSGDVPQKKRESLL
KKFQAGQLELLVATDVAARGLHIDGVSHVFNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPSEPVTAELLTALPRPERPKPAAGEGDDEEESVSQIFREA
REQKAADEERRGGGRKPGGSGGAGRRDGARRDGPRSADGKPRPPRAPRAPRPEGEAVAAA
APAARVAEVPRPEAAALPEGERKPRKRRRRRHGRPLEGAEGAVANVAPAAPKPAAAPKPA
DENAGFLTRLGRKIRSLVSGG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaccgttaaccgatataactttctcttcgttcgacctgcatccggcgctt
ctggccgggctggaagccgcaggtttctcccgctgcacgcccatccaggcgatgacgctt
ccggttgccctcgcgggccgcgacgtggccggccaggcgcagaccggcaccggcaagacg
ctggcgttcctggtggcggtgatgaaccgcctgctgatccgcccggcgctggccgatcgc
aagcccgaggatccgcgcgcgctgatcctggcgcccacgcgtgagctggccatccagatc
cacaaggatgccgtgaagttcggcgccgacctcgggctgcgcttcgcgctggtctacggt
ggcgtggactacgacaagcagcgcgaactgctgcagcagggcgtggacgtcatcatcgcc
accccgggccgcctgatcgactacgtcaagcagcacaaggtggtcagcctgcacgcctgc
gagatgtgcgtgctggacgaagccgaccgcatgttcgacctgggcttcatcaaggacatc
cgcttcctgcttcggcgcatgcccgagcgcacgacgcggcagacgctgctgttctcggcc
acgctgtcgcaccgcgtgctggagctcgcctacgagcacatgaacgagcccgagaagctc
gtcgtcgagaccgagttcatcaccgcggccaaggtacggcagaagctctactacccggcc
gatgaagaaaagatcccgctgctgatcggcctgctgtcgcgcagtgaaggcgcgcgcacc
atggtgttcgtcaacaccaaggcgttcgtcgagcgtgttgcccgagcgctggaacgggcc
ggctaccgcgttggcgtgctgtccggcgacgtgccgcagaagaagcgcgaatcgttgctg
aagaagttccaggccggccagctggaactgctggtggccaccgacgtggccgcgcgtggc
ctgcatatcgatggcgtgtcgcacgtgttcaactacgatctgccgttcgacgccgaggac
tacgtgcaccgcatcggccgcaccgcgcgcctcggcgccgagggcgatgcgatcagcttc
gcctgcgagcgctatgcgatgtcgctgcccgacatcgaggcctacatcgagcagaagatc
ccgtccgagccggtcaccgccgagctgctgacggcgctgccgcgtccggagcgtccgaag
ccggcagcgggtgagggcgatgacgaagaagaaagcgtcagccagatcttccgcgaggcc
cgcgaacagaaggcggcggacgaagagcgccggggtggtggccgcaagcccggtggatcc
ggtggcgccggtcgtcgcgacggtgctcgccgcgacggcccgcgctcggccgatggcaag
ccgcgtccgccgcgcgcaccgcgtgcgccacgccccgaaggtgaggctgtcgccgcggct
gcaccggcggcgcgcgttgccgaagtgccgcgtcccgaggccgccgcgctgccggaaggc
gagcgcaagccgcgcaagcgccgtcgtcgtcgccatggccgtccgctcgagggggccgaa
ggtgccgtggcgaacgtcgcgccggccgcaccgaagcccgcagccgcaccgaagcccgcc
gacgagaatgcgggtttcctgacgcgcctcggacgcaagatccgctcgctggtgtccggc
ggctga
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