Pseudoxanthomonas sp. SE1: OY559_19130
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Entry
OY559_19130 CDS
T10619
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psse Pseudoxanthomonas sp. SE1
Pathway
psse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OY559_19130 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psse03400
]
OY559_19130 (mutM)
Enzymes [BR:
psse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OY559_19130 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OY559_19130 (mutM)
DNA repair and recombination proteins [BR:
psse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OY559_19130 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WFC41850
LinkDB
All DBs
Position
4074618..4075445
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGLAPHVEGRRIQAVTLRRPDLRWPIPPEVARELPGQRIDAVRRRAKYL
LMDTAAGSAVLHLGMSGSLRVLPAATPVGAHDHVDIVLDGERGRSGRVLRFTDPRRFGCV
LWQPVGQVHPLLQGLGPEPLSDAFDGDYLFALSRGRRAPVKTFLMDQAVVVGVGNIYAAE
SLFRAGISPLRAAGKVSRERYAALADAVKDILAYAITRGGTTLRDFLSPDGAPGYFEQEL
SAYGRGGEACPRCGRAMKQATIGQRTTVWCGHCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtcgaaaccacccgccgcggcctggcgccccacgtggagggg
cgccgcatccaggcggtgacgctgcgcaggcccgacctgcgctggccgatccccccggag
gtggcacgcgaactgcccggccagcgcatcgatgccgtccggcgccgtgcgaaatacctc
ctgatggacaccgccgcaggcagcgccgtgctgcacctgggcatgtccggcagcctgcgc
gtgctgccggccgctaccccggttggcgcgcacgaccacgtggacatcgtgctggatggc
gaacgtggcaggtccggccgggtgctgcgcttcaccgatccgcgccgcttcggctgcgtg
ctgtggcagcccgtcggccaggtgcatccgttgctgcaggggctgggaccggagccgttg
tcggatgcgttcgacggcgactatctgttcgcactcagccggggccggcgggcgccggtg
aaaaccttcctgatggaccaggccgtggtggtgggggtaggcaacatctacgcggcggaa
agcctgttccgtgccggcatttccccgctgcgtgcggccggcaaggtgtcgcgggaacgc
tacgcggcactggccgacgcggtaaaggacatccttgcctatgccatcacgcggggcggg
accacgttgcgggatttcctcagcccggacggcgctcccggctatttcgagcaggaattg
tcggcgtatggccggggcggcgaagcctgtccgcgctgcggccgggcaatgaagcaggcc
accatcggccagcggaccacggtctggtgcgggcactgtcaacgctga
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