Pseudomonas sp. SGAir0191: CWR53_07645
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Entry
CWR53_07645 CDS
T12047
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pssg Pseudomonas sp. SGAir0191
Brite
KEGG Orthology (KO) [BR:
pssg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssg03032
]
CWR53_07645 (topA)
03400 DNA repair and recombination proteins [BR:
pssg03400
]
CWR53_07645 (topA)
Enzymes [BR:
pssg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CWR53_07645 (topA)
DNA replication proteins [BR:
pssg03032
]
Prokaryotic type
DNA Topoisomerases
CWR53_07645 (topA)
DNA repair and recombination proteins [BR:
pssg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CWR53_07645 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUA32467
LinkDB
All DBs
Position
1683174..1685783
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA
PALSPKEKARRQLVARMGVDPDQGWKAKYEILPGKEKVIDELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWSKIARGLSAGRVQSVAVKLVVEREREIRAFIPQEYWEIHADLGTAKNAKV
RFEVARENGEAFKPLNETQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSSDALEMARSYIEREFGKQYLPETPQV
YGSKEGAQEAHEAIRPSDVSTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VAAGSFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLMQLDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTAGMEENLDDVAHGERDWKNVLDEFYGDFSKKLQTAESSEHGMRANQPTMTN
IPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLVPGDEIAADDEGESESRVLL
GKHRCPVCATAMDAYLLDEKHKLHICGNNPDCPGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVCEIVPHKHEIDPKYHFLCEAPQKDPEGRPTVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGKAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaagtcgagtatcggccatatccgagaccttcccaccagc
ggttcggcgagcgcgagcaaagagccggccgccaagcgtggcaaggcggcgggtgaggca
ccggccctttcgcccaaagaaaaggcgcgccgccaattggttgcacgcatgggcgtcgac
ccggaccagggctggaaagccaagtacgagatccttcctggcaaggaaaaggtgatcgac
gagctgcgccgcctggccaaggatgccgacaccatctacctcgcgaccgacttggaccgc
gaaggggaggcaatcgcctggcacctgcgtgaggccatcggtggcgacgatacccgctac
aagcgcgtggtgttcaacgaaatcaccaagaaggccattcaggaagcgttttcgcagcct
ggtgagctcgacattgatcgggtcaacgcgcagcaggcgcgtcgttttctcgaccgtgtg
gtgggctacatggtgtccccgctgctgtggtccaagattgcccgcggcctgtcggccggg
cgggtgcagtcggtagccgtcaagctggtggtcgagcgtgaacgcgagattcgcgccttc
attcctcaggaatactgggaaattcatgccgatctcggcaccgccaagaacgccaaggtt
cgcttcgaagtcgcccgtgaaaatggcgaggccttcaagccgctgaacgaaacccaggcc
atggccgcgctggagaagctcaaggcatcgagctacagcgtcgtcaagcgtgaagaccgc
ccgactagcagcaagccatcggcgcccttcattacctcgaccctgcaacaggcagcgagc
aatcgcctggggttcggcgtgaagaaaaccatgatgatggcccagcgtctgtatgaagcg
ggttacatcacctacatgcgtaccgattcgaccaacctgtcgagcgatgcgctggaaatg
gcgcgcagctacatcgagcgcgaattcggcaagcagtacctgcccgaaacgccgcaggtg
tacggcagcaaggaaggggcccaggaggcgcacgaagccatccggccgtcggacgtgagc
acccacccgaccaagctcagcggtatggagcgcgatgccgagcggttgtacgagctgatc
tggcgtcagttcctggcctgccagatgccgccggcccagtacctgtccaccagcgtgacc
gtggcagcgggcagcttcgagctgcgtgccaagggccgcatcctgaagttcgacggttac
acccgcgtgttgccgcagcagagcaagcctggcgaagacgacgtgctgcctgagatggtg
cagggtgaagcgctcaagctgatgcagcttgaccctagccagcacttcaccaagccgcct
gcccggttcaccgaggccagcctggtcaaggaaatggaaaaacgcggcattggccgacca
tcgacctatgcggcgatcatctcgaccattcaggaccgcggctatgtgacgttgcacaac
cgtcgtttctattcggaaaagatgggcgacatcgtgaccgagcggctctccgagagtttt
tccaatttgatggactacggtttcaccgccggcatggaggaaaacctcgacgacgtcgcc
cacggcgagcgcgactggaagaacgtgctggacgagttctacggcgacttcagcaagaaa
ttgcagacggccgaatccagcgaacatggtatgcgcgccaatcagccgacgatgaccaac
attccttgcaaggagtgcggtcgcccgatgatgattcgtacagcgtccacgggcgtgttc
ctgggctgctccggttacagcctaccacctaaagagcgctgcaagtccacggtcaacctc
gtgcctggtgacgagatcgctgctgacgatgagggcgaatcggagtcgcgcgtgctgctt
ggcaagcaccgctgcccagtttgcgcaacggcgatggacgcttacctgctcgatgaaaag
cacaagctgcacatttgcgggaacaaccctgattgcccgggttacgagatcgaagagggc
agctatcgcatcaagggctacgaaggcccaagccttgagtgcgacaagtgcggcagcgaa
atgcagctcaagaccggacgcttcggcaagttcttcgggtgcaccaaccctgcgtgcaag
aacacccgcaagctgctcaaaagcggtgaagcggcgccgccgaagatggacaaagtcgac
atgcccgagcttaagtgcgagaaggtggacgacacctatgtgctgcgcgatggtgcttcg
gggctgttcctggctgccagccagttcccgaagaaccgcgaaacacgtgcgcccttggtg
tgcgagattgtcccgcacaagcatgaaatcgatcccaagtaccatttcttgtgcgaagcg
ccgcagaaagatcccgagggtcgaccaaccgtaattcgctacagccgcaagaccaaggag
cagtacgtccagtcggaagtggacggcaagcccacgggttggaaagcgttttacgatggt
aaggcctggaaagtcgaagacaagcgctga
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