Pseudomonas sp. SGAir0191: CWR53_11405
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Entry
CWR53_11405 CDS
T12047
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pssg Pseudomonas sp. SGAir0191
Pathway
pssg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pssg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CWR53_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pssg03021
]
CWR53_11405
Transcription machinery [BR:
pssg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CWR53_11405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_28
GerE
HTH_29
RovC_DNA-bd
HTH_36
HTH_11
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AUA33157
LinkDB
All DBs
Position
complement(2546689..2547201)
Genome browser
AA seq
170 aa
AA seq
DB search
MFEAAPPPTQSFPDLYREHRGWLEGWLRRRMGNAWDAADLSQDTFLRVMASAQPLTDIRE
PRAYLLTVGKRLLSNLHQRRSLEKAYLEALVHLPEQHAPSPEQRWLLLETLQALDQLLDG
LKPVVRKAFLLSQLEGLSYAEIASRLGVCERSVKRYMAQAYEHCLLAELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagccgcgccgccgcccacgcaaagcttccctgacctttatcgggagcaccgt
ggctggctcgaaggctggctacgacggcgcatgggcaatgcctgggatgcggccgacctg
agtcaggataccttccttcgcgtgatggccagcgcccagccgttgaccgacatccgcgag
ccacgcgcctacctgctgacggtcggcaagcgacttctaagcaaccttcaccaacgccgc
agcctcgagaaagcctaccttgaggccctggtgcacctgcccgaacagcacgcgccttcg
cccgaacagcgctggttgttgctcgaaacgctgcaagcgctcgatcaattgctggacggt
ttgaagccggtcgtgcgcaaggcttttctgctaagccagctcgaagggctgagctacgcc
gaaatcgccagccggcttggtgtttgtgagcgttcggtcaagcgctacatggcgcaggcc
tacgagcactgcctgttggccgaacttcagtga
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integrated database retrieval system
