Pseudarthrobacter sp. So.54: ACOM2C_00600
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Entry
ACOM2C_00600 CDS
T11055
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
psso Pseudarthrobacter sp. So.54
Pathway
psso02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psso00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACOM2C_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psso03021
]
ACOM2C_00600
Transcription machinery [BR:
psso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOM2C_00600
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
RBR
Motif
Other DBs
NCBI-ProteinID:
XTR52112
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All DBs
Position
130224..131552
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AA seq
442 aa
AA seq
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MTPSSAKKEPADQAVLSPEEKKAATSAKRAATRAANKAVKDAASADGDSTASAVAKPEPK
KRGPKPGAKAAAQAAGKAANGDDDEEAEVDLDDVVVGAVELGEDGEEIPAKAAAATGSGF
VYSDADDDDAPVQQVMSAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLFAEEKI
NADDGTMDPKLKRELEFVIHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNL
GLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQM
LQDLGREPTPEELALELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVV
PADAVSFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQI
ESKTMSKLRHPSRSQVLRDYLD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgtcttccgcgaagaaggaacccgccgaccaggccgtattgtccccagaggag
aagaaggcggcgacgagcgccaagcgcgccgccacgcgagccgccaacaaggctgtcaaa
gacgccgcctcggccgatggtgacagcaccgcgtcggcagtcgccaagcctgagccaaag
aagcgcgggcccaagcccggcgctaaagccgcggcgcaggccgccggcaaagccgccaac
ggtgatgacgacgaagaagccgaggtagacctcgacgacgtcgtcgtcggagcagtcgag
ctcggtgaggacggcgaggagatcccggccaaggcagcagctgctaccggctccggcttc
gtctactccgatgccgacgacgacgacgcgcccgtgcagcaggtcatgtcggcgggcgcc
accgccgaccctgtcaaggactacctgaagcagatcggcaaggtcgccctgctgaacgct
gagcaggaagttgacctcgccctgcgcatcgaagcaggcctcttcgccgaggaaaagatc
aacgccgacgacggaaccatggatccgaagctcaagcgcgagctcgaattcgtcatccac
gatggcaagcgcgccaagaaccacctgctggaggccaacctccgcctcgtggtctccctg
gccaagcgctacaccggccgcggcatgctcttcctggacctgatccaggaaggcaacctg
ggcttgatccgcgcggtggagaagtttgactacaccaagggcttcaagttctccacctac
gccacctggtggatccgccaggccatcacccgtgccatggccgaccaggcccgcaccatc
cgcatcccggtgcacatggtcgaagtcatcaacaagctggcacgcgtgcagcgccagatg
ctgcaggacctcggccgcgaacccaccccggaggagctggccctcgaactggacatgaca
ccggaaaaggtcgtcgaggtccagaagtacggccgcgaaccaatttcactgcacaccccg
ctgggcgaagacggcgattcggagttcggtgacctcatcgaggactccgaggccgtggtt
ccggcggatgcagtgagcttcaccctgctgcaggaacagctgcactcggtgctggacacc
ctttccgagcgcgaggccggcgtggtcgcgatgcgtttcgggttgaccgacggacagccg
aagacgttagacgaaatcggcaaggtttacggggtcactcgtgagcggatccgccaaatc
gaatccaaaaccatgtccaagctgcggcacccgtcgcggtcccaggtactccgggattac
ctggactag
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