KEGG   Pseudarthrobacter sp. So.54: ACOM2C_00600
Entry
ACOM2C_00600      CDS       T11055                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
psso  Pseudarthrobacter sp. So.54
Pathway
psso02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psso00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ACOM2C_00600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psso03021]
    ACOM2C_00600
Transcription machinery [BR:psso03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACOM2C_00600
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 RBR
Other DBs
NCBI-ProteinID: XTR52112
LinkDB
Position
130224..131552
AA seq 442 aa
MTPSSAKKEPADQAVLSPEEKKAATSAKRAATRAANKAVKDAASADGDSTASAVAKPEPK
KRGPKPGAKAAAQAAGKAANGDDDEEAEVDLDDVVVGAVELGEDGEEIPAKAAAATGSGF
VYSDADDDDAPVQQVMSAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLFAEEKI
NADDGTMDPKLKRELEFVIHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNL
GLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQM
LQDLGREPTPEELALELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVV
PADAVSFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQI
ESKTMSKLRHPSRSQVLRDYLD
NT seq 1329 nt   +upstreamnt  +downstreamnt
gtgaccccgtcttccgcgaagaaggaacccgccgaccaggccgtattgtccccagaggag
aagaaggcggcgacgagcgccaagcgcgccgccacgcgagccgccaacaaggctgtcaaa
gacgccgcctcggccgatggtgacagcaccgcgtcggcagtcgccaagcctgagccaaag
aagcgcgggcccaagcccggcgctaaagccgcggcgcaggccgccggcaaagccgccaac
ggtgatgacgacgaagaagccgaggtagacctcgacgacgtcgtcgtcggagcagtcgag
ctcggtgaggacggcgaggagatcccggccaaggcagcagctgctaccggctccggcttc
gtctactccgatgccgacgacgacgacgcgcccgtgcagcaggtcatgtcggcgggcgcc
accgccgaccctgtcaaggactacctgaagcagatcggcaaggtcgccctgctgaacgct
gagcaggaagttgacctcgccctgcgcatcgaagcaggcctcttcgccgaggaaaagatc
aacgccgacgacggaaccatggatccgaagctcaagcgcgagctcgaattcgtcatccac
gatggcaagcgcgccaagaaccacctgctggaggccaacctccgcctcgtggtctccctg
gccaagcgctacaccggccgcggcatgctcttcctggacctgatccaggaaggcaacctg
ggcttgatccgcgcggtggagaagtttgactacaccaagggcttcaagttctccacctac
gccacctggtggatccgccaggccatcacccgtgccatggccgaccaggcccgcaccatc
cgcatcccggtgcacatggtcgaagtcatcaacaagctggcacgcgtgcagcgccagatg
ctgcaggacctcggccgcgaacccaccccggaggagctggccctcgaactggacatgaca
ccggaaaaggtcgtcgaggtccagaagtacggccgcgaaccaatttcactgcacaccccg
ctgggcgaagacggcgattcggagttcggtgacctcatcgaggactccgaggccgtggtt
ccggcggatgcagtgagcttcaccctgctgcaggaacagctgcactcggtgctggacacc
ctttccgagcgcgaggccggcgtggtcgcgatgcgtttcgggttgaccgacggacagccg
aagacgttagacgaaatcggcaaggtttacggggtcactcgtgagcggatccgccaaatc
gaatccaaaaccatgtccaagctgcggcacccgtcgcggtcccaggtactccgggattac
ctggactag

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