Pseudarthrobacter sp. So.54: ACOM2C_06040
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Entry
ACOM2C_06040 CDS
T11055
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psso Pseudarthrobacter sp. So.54
Pathway
psso03030
DNA replication
psso03430
Mismatch repair
psso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOM2C_06040
03430 Mismatch repair
ACOM2C_06040
03440 Homologous recombination
ACOM2C_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psso03032
]
ACOM2C_06040
03400 DNA repair and recombination proteins [BR:
psso03400
]
ACOM2C_06040
Enzymes [BR:
psso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOM2C_06040
DNA replication proteins [BR:
psso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACOM2C_06040
DNA repair and recombination proteins [BR:
psso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACOM2C_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
XTR52816
LinkDB
All DBs
Position
complement(1217428..1218447)
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AA seq
339 aa
AA seq
DB search
MGLDFTAIDFETANGFRGSPCAVGLSKVRGGVVVEEASWLMRPPQNHDRFDHHNVRIHGI
RPEQVAGLPRFGELFPEIGAFIGGDVLAAHNAAFDLGVIRSGLEVSGLPGPAYDYVCTVM
LSRRCYSLVSNSLPYAAQEAGVPLVNHHDAAEDARACAGILIDIAARNGAASIAELYLSL
GLAVSRQEAFHPLRDPLSKASQSALDALAAGPSAAAAVRAYLPGWPEEGANPPPNLLAEA
GHPLFGQTVVFTGELAIPRPEAKVRSAEHGARPESRVTARTTVLVVGDGFDAADLRSGRL
TGKARRVLELHERGQRIEVLSEGEFLQMVGGHVASAAIS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttggactttacagcgatcgactttgagaccgcgaatggcttccgtggttcaccg
tgtgcggttgggctcagcaaggtgcgtggcggtgtcgtggttgaggaagcgtcgtggctg
atgcggccgccgcaaaaccatgaccgctttgaccaccacaacgtacggatccacggcatc
cggcccgagcaagtggccgggctgccgcgcttcggggagctcttcccggagatcggggcg
ttcatcggcggagacgtgctggccgcccacaacgccgccttcgacctcggggtgatccgt
tccggcctggaagtatccggcctgcccggcccggcgtatgactatgtctgcacggtgatg
ctgtcccgccgctgctattcgctggtgtccaattccctgccgtacgcggcccaggaggcc
ggcgtgccgctggtcaaccaccacgacgccgccgaggatgcccgcgcctgcgccggcatc
ctgatcgatatcgccgcccgcaacggcgccgccagcatcgccgagctgtacctttccctg
ggtctggcggtgtcccggcaggaggcctttcacccgctgcgagatcccctttccaaagcc
agccagtcagccctcgacgccttggcggcaggtccctccgcggcggccgccgtgcgggcc
tacctgcccggctggccggaagagggcgccaacccgccgccgaaccttctcgccgaggcc
ggccaccccctgttcggccagaccgtggtgttcaccggagaactcgccataccccgtccc
gaggccaaggtccgttccgccgagcacggggcacggcccgagagccgcgtcaccgcccgc
accaccgtcctggtggtgggagacgggttcgacgccgccgacctgcgctccggcaggctc
accggcaaagcgcgccgggtgctggaactgcacgagcgcggccagcggatcgaggtcctc
tccgagggcgagttcctgcagatggtcggcggccacgtggcctccgccgcgatttcctga
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