Pseudarthrobacter sp. So.54: ACOM2C_08655
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Entry
ACOM2C_08655 CDS
T11055
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psso Pseudarthrobacter sp. So.54
Pathway
psso03018
RNA degradation
Brite
Enzymes [BR:
psso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACOM2C_08655
Messenger RNA biogenesis [BR:
psso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACOM2C_08655
Ribosome biogenesis [BR:
psso03009
]
Prokaryotic type
rRNA helicases
ACOM2C_08655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XTR53143
LinkDB
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Position
complement(1745434..1747542)
Genome browser
AA seq
702 aa
AA seq
DB search
MPENQNNSVDTENLQSDVETSETAAPAAGSAPEFTEAPADHEAPAAAEAAPQTESKPETA
SAPAKEDDAEEEGVKFVDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQT
GTGKTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTV
LPVYGGSAYGPQLNGLRRGAQVVVGTPGRVIDHITKGSLDLSELQYLVLDEADEMLRMGF
AEDVEQIFQQTPAGRQVALFSATMPSQIRRLSKQYLNNPAEVQVKSKTTTGANTRQRYLQ
VMGPHKLDALTRILEVEEFEGVIAFVRTKMATEDLADKLRARGFQAAAINGDIPQQQRER
TVEALRDGKIDILVATDVAARGLDVERVSHVVNYDIPHDTESYVHRIGRTGRAGRSGDAI
LFMTPREKYLLRSIEKATRQPVEQMHLPTAESVNTLRLGKFAEKITETLASEDVAAFRDL
IASYEEEHNVPASEIAAALAVMAQGGQPLLVKELPAAPEFQKRERAKDGFGSRGPTRTLT
EGNATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRADHSLVELPADLSADQLK
ALSRTRIGGELIHLELDNGRKPSGDRGGYQGGSRGGERGGYSGGGDRGGDRGGNFKGNGG
FKREFRKNDGERSSADRGGRSFSDRNERGVGTDAARKPRTKW
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaatcagaacaactccgtcgacaccgaaaaccttcagagcgacgtcgagact
tctgaaacggctgcccccgcagccggctccgccccggaattcaccgaggcgcctgcggac
cacgaagctccggccgccgccgaagccgcaccgcagaccgaatccaagcccgaaaccgcg
tcagctccggcgaaggaagacgacgccgaagaagagggcgtcaagttcgtagacctcggc
attgacggccgcgttctcgctgccctgcaggatgtgggctacgagaagccttcgccgatc
caggcagcaaccatcccgctgctgctcgaaggccgcgacgtcgtgggcctggcccagacc
ggtaccggtaagactgcagcattcgcagtaccggcactgtcccgtctcgccgagctccac
gacctcaacggcccgtcccgcaagacccaggccctggtgctcgcaccaacccgtgagctc
gcgctccaggttgcagaggccttcacctcctacgccaagcacatcgacgacttcaccgtc
cttccggtgtacggcggctccgcctacggcccccagctcaacggcctgcgccgcggagcc
caggtagtcgtcggtacccccggccgcgtgatcgaccacatcaccaaggggtccctggac
ctgtccgagctccagtacctcgtcctggatgaagccgacgaaatgctccgcatgggcttc
gccgaagacgtggagcagatcttccagcagacccccgcgggccgccaggttgccctgttc
tccgccacgatgccgagccagatccggcggttgtccaagcagtacctgaacaacccggcc
gaggtgcaggtcaagtccaagaccaccacgggcgccaacacccgccagcgctacctgcag
gtcatgggcccgcacaagctcgacgcgctgacccgcatcctcgaggtggaagagttcgag
ggcgttattgccttcgtgcggaccaagatggccaccgaggacctcgccgacaagctccgc
gctcgcggtttccaggcggccgccatcaacggcgacatcccgcagcagcagcgtgagcgt
acggtcgaggccctgcgtgacggcaagatcgacatcctcgtcgcgaccgacgtcgcggcc
cgcggcctcgacgtcgagcgcgtcagccacgtggtcaactacgacatcccgcatgacacc
gagtcctacgtgcaccgcatcggccgcaccggccgcgcaggccggtccggtgacgcgatc
ctcttcatgacgccgcgggagaagtacctgctgcggtccatcgagaaggcgacccgccag
ccggtggagcagatgcacctgcctaccgccgagtcagtcaacactcttcgcctgggcaag
ttcgcggaaaagatcaccgaaaccctggcctccgaagacgtggcggcgttccgcgacctc
atcgcttcctacgaggaagagcacaacgtcccggcctcggaaatcgctgccgcactggca
gtcatggcacagggcggccagccgctgctggtcaaggaactgcccgcagctcctgaattc
cagaagcgcgagcgcgccaaggacggcttcggctcccgcggccccacccgcaccctgacc
gagggcaacgccacctaccggatcgccgtcggacgccgtcagcgcgtgatgcccggttcg
atcgttggcgctattgccaacgaaggcggcatctcctcggcccagatcggcggcatcgac
atccgcgccgaccactccctcgtggagctcccggcggatctcagcgccgaccagctcaag
gccctgtcccgcacccggatcggcggcgagctgatccacctcgaactggacaacggccgc
aagccctccggtgaccgtggcggctaccagggcggcagccgtggcggagagcgcggcggg
tactccggcggcggtgaccgtggcggtgaccgtggcgggaacttcaagggcaacggcggc
ttcaagcgcgagttccgcaagaacgacggcgagcggtcctccgctgaccgcggcgggcgc
tccttcagtgaccgcaacgagcgcggcgtcggcaccgacgcagcccgcaaaccgcggacc
aagtggtaa
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