Pseudarthrobacter sp. So.54: ACOM2C_08960
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Entry
ACOM2C_08960 CDS
T11055
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psso Pseudarthrobacter sp. So.54
Brite
KEGG Orthology (KO) [BR:
psso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psso03032
]
ACOM2C_08960
03400 DNA repair and recombination proteins [BR:
psso03400
]
ACOM2C_08960
Enzymes [BR:
psso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACOM2C_08960
DNA replication proteins [BR:
psso03032
]
Prokaryotic type
DNA Topoisomerases
ACOM2C_08960
DNA repair and recombination proteins [BR:
psso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACOM2C_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XTR53187
LinkDB
All DBs
Position
complement(1806075..1807064)
Genome browser
AA seq
329 aa
AA seq
DB search
MRLRRSNASGRGYRRVASGTGFSYKDLDGSTLAAGPVRERLEGIGIPPAWTDVWIAPFDN
GHIQATGVDAVGRRQYIYHPGWRERKDRLKFDRSLQLAETLPAARRRVTLDLRSEGLTRE
RVLGAAFRMLDSGSLRVGSERYTNENGSHGLATLLCAHVKVHKDELRLSFPAKSGKTWES
RMHDADLAAVVRQLKRRGGNARLLAYKAGRRWHPVSSSEINQYVKERTGQDFTAKDFRTL
RGTVAAAASLARSGPQPKVSTRKRAVSRAMVDASEVLGNTPSIARKSYVDPRLLDHFAAG
DTIDPKRLDSAESEVRALLYREGDVVPLR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctccggcgcagtaacgcgtccggccgcggctaccggcgcgtcgcctccgggaca
ggcttcagctacaaggacctggacggttccaccctcgccgcggggcccgtgcgtgagcgg
ctcgaaggcatcggcattccgccggcctggaccgacgtctggattgccccgttcgacaac
gggcacatccaggccaccggggtggacgccgtgggccggcgccagtacatctaccacccg
ggctggcgggaacggaaggaccggctgaagttcgaccgttcgctccagctcgcggaaaca
ttgccggcggcgcggcggcgcgtcaccctcgacctgcgttccgagggcctcacccgggag
cgggtgctgggcgctgcctttcggatgctggacagcggctcgctgcgggtcggctcggag
cgctacaccaacgagaacggcagccacggcctcgccaccttgctctgcgcccacgtgaag
gtgcacaaggacgagctccgcctcagtttccccgccaagagcgggaagacctgggagtcg
cggatgcacgacgccgacctcgccgccgtcgtgcgccaactcaagcgccggggcggcaac
gcccgcctgttggcctataaggcgggcaggcgctggcatccggtgtccagctccgagatc
aaccagtacgtcaaagaacgcaccggccaggacttcacggccaaggacttccggaccctg
agggggacggtggcggcggccgccagcctggcccggagcggtccgcagcccaaggtctcc
acccgcaagcgcgcggtgagccgcgccatggtggacgcgtccgaagtccttggcaatacg
ccgtccatcgcccggaagagctatgttgatccgcggctcctggaccactttgcggcgggg
gacaccatcgacccgaagcggctggactccgccgaatccgaggtccgcgccctgctctac
cgcgagggggacgtggtcccgctgcgctga
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