Pseudomonas sp. SXM-1: DCC84_01255
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Entry
DCC84_01255 CDS
T11095
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DCC84_01255
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QBQ08457
LinkDB
All DBs
Position
complement(269076..271400)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLAPETEAARFVDAEKGVADVKAALEGAKYILMERFAEDANLLEKLRN
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLSEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAISVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPGMQMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP
KKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQGAAPRKETAAPAPANNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggcgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccacagtgcccttcatcgcccgttaccgtaaa
gaagtcaccggcagcctcgatgatatccagttgcggcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtatcagcatcctcgccagcattgaagagcaaggcaag
ctgaccccgcagctggaacgcgacatcaagctcgccgacaccaagacgcgcctcgaagac
ttgtacctcccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggtctgttcaacgacccgtccctggccccggaaaccgaagct
gcacgctttgtcgatgccgaaaaaggcgtggccgacgtcaaggccgccctcgaaggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccaacctgctggaaaaactgcgcaac
tacctgaagcaggaagccaccctcagtgcccgcgtaatcgccggcaaggaagaggaaggc
gccaagttccgcgattacttcgaacacgacgagccgctgaaaagcatgccgtcccaccgt
gcactggcgattttccgcggccgcaacgaaggcatcctgagctccgcgctgaaagtcggc
gacgagctgccaggcaccatgcacccgtgcgaaggcatgatcggtcaacagttcggcatc
cagaatcagaatcgtcctgcggacaagtggctcagtgaggtcgtgcgctggacctggaag
gtcaagctctacacccacctcgaaaccgacctgctgggcgagttgcgcgacggcgccgaa
accgaagccatcagcgtattcgcccacaacctgcacgacctgctgctggccgcacccgcc
ggcccacgcgcgaccctgggcctcgacccgggcctgcgcaccggctgcaaggttgccgtg
gtcgacgccaccggcaagctgctggatcacgccacggtttacccccacgtgccgcacaac
aagtgggaccagaccatcgccatcctggccgccctgtgcgccaagcactcggtggacctg
attgccatcggcaacggcaccgccagccgtgaaaccgacaagctggccgccgagctgatc
aaaaaatacccaggcatgcagatgaccaaggtgatggtctccgaggccggcgcttcggtg
tactccgcgtctgaactggcttccaaggaattcccggacctcgacgtgtcgatccgtggc
gccgtgtccattgctcgccgcctgcaggacccactggccgagctggtgaagatcgacccg
aaatccatcggcgtcggccagtaccagcacgacgtgtcgcagctgaaactggctcgcggc
ctggacgccgtggttgaagactgcgtgaacgccgtgggcgtggacgtaaacaccgcttcg
gttgcgctgctggcccgcatttccggtctcaacgccaccctggcgcagaacatcgtgacc
caccgcgacgaaaacggtgcgttcaagacccgtgcagcgctgaaaaaagtcgcacgcctt
ggcgaaaaaaccttcgagcaagccgccggcttcctgcgcgtcatgaacggtgacaacccg
ctggattcctcggctgtccacccggaagcctacccgctggtacaacgcatcgccgctgaa
accgaccgcgacatccgctcgctgatcggcgacgccgcattcctcaagcgcctggacccg
aagaagtacaccgacgaaaccttcggcgtgccgaccatcaccgacatcctgcaagagctg
gaaaaacctggccgcgacccgcgtcccgagttcaagaccgccgaattccaggaaggcgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggcgtggtgaccaacgtgacc
aacttcggcgcgtttgtggatatcggcgtgcatcaggacggtttggtgcacatctctgcg
ctttcggagaagttcatcaaggacccgcgtgaagcggtgaaagccggtgatgtggtcaag
gtcaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacaccccgggcgagaaaatcgacggtgcccgcggcgcacgcccgggctcggcgccacgc
cagtcccaaggcgccgccccccgcaaggaaaccgctgcgccagccccggccaacaacgcc
atggcttcgctgttcgccaacgccaaacaactgaagaaacgttaa
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