KEGG   Pseudomonas sp. SXM-1: DCC84_02415
Entry
DCC84_02415       CDS       T11095                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DCC84_02415
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pssx02044]
    DCC84_02415
Secretion system [BR:pssx02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DCC84_02415
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: QBQ08669
LinkDB
Position
521448..523481
AA seq 677 aa
MFAPANQSAFSLTLDGVPSVLKVREFTGDEFISLPYRFDLELVSEQPDLDLESLMHRQAF
LGFDAHGHGIHGQVYRVAQGDSGKRLTRYQITLVPRLAYLEHSAHQRIFQSRTVPQIIAL
VLEGQGIQADAFSFQLSGVYPEREYCVQFGETDLAFIQRLCAESGIHYHFQHHPERHLLV
FGDDQSVFAQPEQATQYAAGSGMVADTPVIKRFTLRLKTRTTDVNLRDYDFRKPRLSLES
TVSGGQRPMLEEQCYPGNFTDRAHGKYLAQRRLERHRGDFRQASGHSDQPSLVSGQFLRM
GGHPRQEWNDLWLVTQVTHAGRQPQVLEESTIDASGDESAQGYSNHFVVTPWEVPFRTPL
LVSRPPVSGYQNAVVTGPAGSEIHCDEYGRVKVQMAWDRAGEHDEHSSCWLRVASGWAHE
HYGSVLIPRVGMEVLVGFVDGDADTPLVVGCLANAATPVPLDLPADKTRSIFRSQTSPGG
GGYNELRIEDRKGAEEIYLRAQRNWTQHVLHDQHVQVDNQRDVIVKGLDRHELQGEEQRT
THGNRLTELKQDDHLMVAGSQQVRAGLTIHIGAGQNVVIDAGASVTLQAGGQWINVSAGG
IFSSTQIQLGGSPAPAGAPLTPGLQEKLLAVIPAPLSAVQVLSLKRSAPFCEECERCRNG
VCNTPLHRNTSLPAGAP
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgttcgctcctgccaatcaaagtgcctttagcctgaccctcgacggtgtgccaagtgtt
ctcaaggtacgtgagttcactggcgatgaattcatcagcctgccctatcgttttgacctt
gaactggtcagcgagcaacccgaccttgacctggaaagcttgatgcatcgccaggcgttc
ctggggtttgatgcgcatggccatggtattcatggccaagtttatcgggtggcacaaggc
gactcgggcaagcgcctgacgcgttatcagatcacgctggttccgcggttggcttatctt
gagcacagcgctcaccagcggattttccagagccggacggtgccgcagatcattgcactg
gtgctggaagggcagggtatccaggcggatgccttctcgtttcaactgagcggggtgtac
cccgagcgtgagtactgcgttcagtttggcgaaaccgatctggcgttcatccagcgcttg
tgcgccgagtcgggcattcactaccacttccagcatcaccccgagcgccaccttttggtg
ttcggcgatgaccagagcgtgttcgcccagcctgagcaagccactcaatacgcggcgggt
tcggggatggttgccgacacgccggtgatcaagcgttttaccctgcggttgaagacccgt
acaaccgatgtgaatctgcgggactacgacttcagaaagccacgcctgagcttggaaagc
acggtgtccggcggccagcgtcccatgctggaggaacagtgttatcccgggaattttacg
gatcgcgctcatggtaaatacctggcgcaacgtaggttggagcgccatcgcggtgacttt
cgccaggccagtggccatagcgaccagccgtccctggtcagcgggcagttcctgaggatg
ggagggcatcctcgccaggaatggaatgatttgtggctggtcacccaggtgacgcatgca
gggcgccagcctcaggtgctggaggagtcgaccatcgacgcctcaggtgatgaatcggct
cagggctacagcaatcactttgtcgtaacgccatgggaggtgccgtttcgaacaccgctg
ctggtatcgcgaccgccggtgtctggctatcaaaacgccgtggttacagggccggcaggc
agcgagatccattgtgacgagtatggccgggtcaaggtgcagatggcctgggatcgcgcc
ggggagcacgacgaacattccagttgctggctgcgggtggccagtggctgggcccatgag
cactacggctcggtgttgatcccgcgggtgggcatggaggtgctggtgggtttcgtcgac
ggcgacgccgacacgccgctggtggtcggttgcctggccaatgccgccacgccggtgccg
ctggacctgccagccgacaagacccgcagcatcttccgtagccagaccagccccggcggc
ggtggctacaacgagctgcgcatcgaggaccgcaagggtgccgaggaaatctacctgcgc
gcccagcgcaactggacccagcatgtactgcacgaccagcacgtgcaggtcgacaaccag
cgcgatgtgatcgtcaaaggccttgatcgtcacgagcttcagggcgaagaacagcgcacc
acccacggcaaccgcctgaccgaactcaagcaggacgatcacctgatggtcgcgggctcc
cagcaggtacgtgccgggttgaccattcacatcggtgccgggcaaaacgtcgttattgat
gcgggtgccagcgtgaccctccaggccggtgggcagtggatcaacgtttcggcgggcggg
attttcagcagcacgcaaatccagcttggcggctccccggcaccggcgggagcgccgctg
acgccggggctgcaggaaaagttgctggcggtaatacctgcaccgttgagtgccgtccag
gtgttaagcctgaagcgcagcgcacccttttgcgaagagtgcgagcgctgcaggaatggc
gtgtgcaatacgcccctgcatcgcaatacatcactgcccgcgggtgcgccatga

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