KEGG   Pseudomonas sp. SXM-1: DCC84_02700
Entry
DCC84_02700       CDS       T11095                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DCC84_02700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pssx03019]
    DCC84_02700
   03009 Ribosome biogenesis [BR:pssx03009]
    DCC84_02700
Messenger RNA biogenesis [BR:pssx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DCC84_02700
Ribosome biogenesis [BR:pssx03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    DCC84_02700
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QBQ08723
LinkDB
Position
591061..591603
AA seq 180 aa
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccttggcc
gaaggtccggtgatcgccattcaccacagcgacgcggtgctggccaccatggacgagtgg
aacacccgcacccacggcaactcgggcctgacccagcgtgtgcgcgacagccgcgtgagc
atggctgaggctgaagccgaaaccatcgccttcctggaaaagtgggtacccaagggcaag
tcgccaatctgcggcaacagcatttgccaggaccgccgctttctctatacccacatgaag
gcgctggaaagctacttccactaccgcaacctggacgtgtcgaccttgaaggagctggcc
gcgcgctgggcgccggaagtcaaagacagcttccacaagggcagcacccacctggcactg
gacgatatccgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaagttc
tga

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