Pseudomonas sp. SXM-1: DCC84_02700
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Entry
DCC84_02700 CDS
T11095
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DCC84_02700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pssx03019
]
DCC84_02700
03009 Ribosome biogenesis [BR:
pssx03009
]
DCC84_02700
Messenger RNA biogenesis [BR:
pssx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCC84_02700
Ribosome biogenesis [BR:
pssx03009
]
Eukaryotic type
Pre-60S particles
RNases
DCC84_02700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QBQ08723
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All DBs
Position
591061..591603
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccttggcc
gaaggtccggtgatcgccattcaccacagcgacgcggtgctggccaccatggacgagtgg
aacacccgcacccacggcaactcgggcctgacccagcgtgtgcgcgacagccgcgtgagc
atggctgaggctgaagccgaaaccatcgccttcctggaaaagtgggtacccaagggcaag
tcgccaatctgcggcaacagcatttgccaggaccgccgctttctctatacccacatgaag
gcgctggaaagctacttccactaccgcaacctggacgtgtcgaccttgaaggagctggcc
gcgcgctgggcgccggaagtcaaagacagcttccacaagggcagcacccacctggcactg
gacgatatccgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaagttc
tga
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