Pseudomonas sp. SXM-1: DCC84_04260
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Entry
DCC84_04260 CDS
T11095
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00550
Peptidoglycan biosynthesis
pssx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DCC84_04260 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pssx01003
]
DCC84_04260 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pssx01011
]
DCC84_04260 (mrcB)
Enzymes [BR:
pssx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DCC84_04260 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DCC84_04260 (mrcB)
Glycosyltransferases [BR:
pssx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DCC84_04260 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pssx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DCC84_04260 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
QBQ08997
LinkDB
All DBs
Position
950548..952872
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AA seq
774 aa
AA seq
DB search
MTRTRSPRSRKKPPSRGLRPWLGWALKLSLVGLVVIAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFSGQKLSKDDFLTELDALGYRREPVSNGPGAAAVSGNTVDLNTRGFQFYEG
LEKPQPVRVRFSGDYVAELSSLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKIDQVPPYL
LDTLIAVEDRDFYSHWGVSPKSIARALWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAMLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLH
QVALLVGMVKGPSYYNPRRNPERALERRNLVLDVLEQQGVATPEQVAAAKKMPLGVTTRG
KLADSSFPGFIDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGR
KGSDDVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKP
SKYTLTSWLSDDPLSVKGADGQMWTPHNFDRRSHGTIFLYQGLAHSYNISTSRLGLELGV
PNVLKTLGRLGITREFPAFPSMLLGAGAMSPMEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPASIYLIQNAMQRVMREGTGRSAYNVLPANLTLAGKSGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMKKADPLPLNMPQPDNIVQA
WIDPHTGQGSDANCPGAVQMPYIRGSEPPPGAACGASAPASAESVMDWVKGWMN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatctccccgttcccgtaaaaaacctccttcccgcggcctgcgccct
tggctgggctgggcgcttaagctcagcctggtagggcttgtcgtgatcgccggcttcgcg
gtttacctcgatgccgtggtccaggagaagttctccggcaagcgctggaccattccggcc
aaggtctacgcgcgcccgctggaactgttcagcggccagaagctgagcaaggatgacttc
ctcaccgagctcgatgccctgggctatcgccgcgaacccgtgagcaatggccctggcgcc
gctgccgtcagcggcaacacggttgacctgaacacccgcggcttccagttctatgaaggc
ctggaaaaaccccagccggtgcgcgtgcgtttctctggcgactacgtagccgaactgtcc
tcgctcaacggctcgaagttgccggtggtgcgcctggaacccttaatgatcggtgggatt
tatccgaaaaacctggaagaccgcatcctgatcaagatcgatcaggtgccgccttacctg
ctggataccctgatcgccgtcgaagaccgggatttctacagccactggggcgtatcaccg
aagtccatcgcgcgcgccctctgggtcaacacctccggcggcaagatgacccagggcggc
agtacgctgacgcagcaattggtcaagaacttctacctgaccaacgagcgcagcctgacc
cgtaagctgaccgaagccatgatggcgatgctgctggagctgcactacagcaagcaggaa
attcttgaggcgtacctcaatgaagtgttcgttggccaggacggtcagcgtgccgtccac
ggttttggtctggccagccagttcttcttcggccagccgttgtccgagctgaagttgcac
caggtggcgctgctggtgggcatggtcaaggggccgtcctactacaacccgcgtcgcaac
ccggagcgggcgctggagcgccgtaacctggtgctggatgtacttgagcagcaaggtgtc
gccacccctgaacaagtggccgccgcgaagaaaatgccactgggtgtaaccacccgcggc
aagctcgccgacagctccttcccgggctttatcgacttggtcaaacgccaactgcgtgaa
gactaccgcgacgaagacttgaccgaagaaggcctgcggatcttcaccagtttcgacccg
atcctgcagatgaaggccgaagcgtcggtcaatgacaccttcaaacgcctgacaggtcgt
aaaggctctgacgacgtcgaggctgcgatggtggtgaccaacccggaaaccggcgaagtc
caggccatgatcggcagtcgccaggccagctttgccgggttcaaccgggcgctggacgcg
gtgcggccgattggctcgctggtcaagccggcggtgtacctgaccgcgctggaaaaaccg
agcaagtacacgctgaccagttggctgtccgatgacccgctgtcggtcaaaggggctgat
ggccagatgtggacgccgcataactttgatcgtcgctcccacggtacgattttcctgtac
caggggttggcgcattcctacaacatctcgacttcccgcctcggccttgaactgggcgtg
ccgaacgtgctcaagacgctcggccggttgggcatcactcgtgagttcccggcgttccca
tcgatgctgttgggtgcgggtgcgatgagcccgatggaagtggcgaccatgtaccagacc
ctggccaacggtggtttcaatacgccgatgcgtgggatccggagcgtgttgacggccgaa
ggcgaaccgctcaagcgctatccgttccagattcagcaacgctttgacccggcctcgatc
tacctaatccagaacgccatgcagcgcgtgatgcgcgaaggtaccgggcgctcggcctac
aacgtgctgccggccaacctgacactggccggcaagagcggtaccagtaacgattcgcgg
gacagctggttcgcaggtttcagccaggacctgctggcagtggtttggctggggcgtgat
gacaacggcaagacgccgtttaccggtgccaccggcgcgttgcaggtatggaccagtttc
atgaaaaaggccgatccactgccgctgaacatgccgcagccggacaatatcgtccaggcc
tggatcgatccgcacaccggccagggttccgatgccaactgtccgggcgcggtgcagatg
ccgtatattcgcggcagcgagccaccacccggtgcagcgtgcggagccagtgcgcccgcc
agtgctgaatcggtgatggattgggtcaagggctggatgaattaa
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