Pseudomonas sp. SXM-1: DCC84_05675
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Entry
DCC84_05675 CDS
T11095
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssx03000
]
DCC84_05675 (treR)
Transcription factors [BR:
pssx03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DCC84_05675 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_41
HTH_11
Rrf2
HTH_IclR
TrmB
FmdA_AmdA
DIP2311-like_C
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QBQ09256
LinkDB
All DBs
Position
complement(1227508..1228212)
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AA seq
234 aa
AA seq
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MSKYNQIYTDLLASITTERLQRGTRLPSETELMDAYQASRGTVRRAIEQLQERGFAQKIH
GKGTFVLSPNPIEFQLGGIVSFRETHAALGDDVSTEVVEFSQFPLEGPLMQHIEAEAGSL
ITRVKRVRRIDGKRVILDINHFVADLIPGLDREIAEQSIYAFIEQTLQLQISYAQRTIEA
LPRGKDDQTHLDLEGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDIARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacaaccagatctataccgatctgcttgccagcatcactaccgaacgcctg
caacgcggcacgcgcctgccctccgaaaccgaattgatggacgcctaccaggccagccgt
ggcacggtacgccgggcgattgagcaattgcaggagcgcggcttcgcgcaaaagatccac
ggcaagggcaccttcgtgctgtcacccaaccccatcgagttccagctcggcggtatcgtc
agctttcgcgagacccatgccgccctcggcgacgacgtcagtaccgaagtggtggagttc
agccagttcccgctggaaggcccgttgatgcagcacattgaggccgaagctggcagcctc
atcacccgggtcaaacgggtgcggcggatcgatggcaaacgagtgatcctcgacatcaac
cacttcgtcgccgacctgataccggggctggatcgggagattgccgagcagtcgatctat
gcgtttatcgaacagaccttgcagctgcagatcagctatgcccagcgcaccatcgaagcg
ctgccacggggaaaggacgatcagacacacctggacctcgaaggtcagagccatgtgatc
gtggtgagcaaccagacgtttttgcaggatggacggcagttcgagtacaccgagtcgcgg
catacgctggataagttttacttttcggatattgcgcggcggtag
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