KEGG   Pseudomonas sp. SXM-1: DCC84_05800
Entry
DCC84_05800       CDS       T11095                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx02024  Quorum sensing
pssx03060  Protein export
pssx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    DCC84_05800
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DCC84_05800
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DCC84_05800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pssx02044]
    DCC84_05800
Enzymes [BR:pssx01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     DCC84_05800
Secretion system [BR:pssx02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   DCC84_05800
  Eukaryotic Sec-SRP protein
   DCC84_05800
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_33 cobW KTI12 ParA YqeC AAA_16 Thymidylate_kin ABC_tran nSTAND3 6PF2K AAA_31 AAA_19 NAT10_TcmA_helicase AAA_5 AAA_14 SLFN-g3_helicase ATP_bind_1 AAA_18 NACHT Gag_FV_central AAA_17 TsaE
Other DBs
NCBI-ProteinID: QBQ09280
LinkDB
Position
1258469..1259845
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEVGVTFFPSDLSQKPVDIAQAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMDNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaatctgactgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaatattaaagacaccctgcgtgaagtgcgcatggcgttgctggaa
gccgacgtcgccttgccggtggtgaaggacttcgtcaactcggtcaaagagcgcgcggtc
ggcaccgaagtgtcccgcagcctgacgccgggccaggcctttgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgcggccaacgaagatttgaacctcagcgccgtgccgcca
gccgttgtgctgatggccggtctgcaaggtgcgggcaagaccaccaccgccggcaaactg
gcgcgcttccttaaagagcgcaagaagaagtcggtgatggtggtgtctgccgacgtttac
cgcccggcggctattaaacagctggaaatgctcgcgggcgaagtgggcgtgaccttcttc
ccgtccgacctgagccagaaaccggtcgatatcgcccaggcggctattaaagaagccaag
ctgaaattcatcgacgtggtcatcgtcgataccgccggtcgcctgcacatcgacgaagag
atgatgggcgagatcaaggcgctgcatgccgcgatcaacccggtagaaaccctgttcgtg
gtcgatgccatgaccggccaggatgcggccaataccgccaaggcctttggtgatgcactg
ccgctgaccggtgtgatcctgaccaaggtcgacggcgatgcccgtggcggtgccgccttg
tcggtacgcgccattaccggcaagccgatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgagccgttccaccctgagcggatcgcctcgcgtatcctcggcatgggcgacgtg
ctcagcctgatcgagcaagcggaagcgaccctcgacaaggacaaggccgacaagctggct
aaaaagctgaagaagggcaagggcttcgacctcgaagacttccgcgaccagctgcagcag
atgaagaacatgggcggcctcggcggcctgatggacaagctgccgaacatcggcggcgtg
aacctggcgcaaatggacaatgcccagggcgcggcagagaagcaattcaagcagatggaa
gccatcatcaattccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaaacgtcggatcgccatgggttccggcacccaggtgcaggacatcggtcgcttgatc
aagcaacacaagcagatgcagaagatgatgaagaaattctccgcaaaaggcggaatggcc
aagatgatgcgcggcatgggcggtatgttgcccggcggcggcatgccgaaaatgtaa

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