Pseudomonas sp. SXM-1: DCC84_06005
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Entry
DCC84_06005 CDS
T11095
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K13490
two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02020
Two-component system
pssx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCC84_06005
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_06005
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pssx01001
]
DCC84_06005
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pssx02022
]
DCC84_06005
Protein kinases [BR:
pssx01001
]
Histidine kinases
CheA family [OT]
DCC84_06005
Two-component system [BR:
pssx02022
]
CheA family
WspE-WspRF (chemosensory)
DCC84_06005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CheW
HATPase_c
Hpt
Motif
Other DBs
NCBI-ProteinID:
QBQ09318
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Position
1300784..1303087
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AA seq
767 aa
AA seq
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MTPDQMRDASLLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIV
GVDAGVSVAHVMEDCLVSAQESRLYLLPEHIDALLQGTDLLMRIATPGNTVGPADIESYV
ALMERLLDPSQKVAPPTAPKPAPPPTPAPEPELSMEALLTLPPEPEPAPPVSAELPRQNK
RMTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPYLASLQRLKRIQSNSARALENLDG
HLKTVDLSLEAQEALADTRRLLSEAQALLAEKTAEIDEFGWQAGQRAQVLYDTALACRMR
PFADVLAGQVRMVRDLGRSLGKQVRLEIEGEKTQVDRDVLEKLEAPLTHLLRNAVDHGIE
MPEQRLLAGKPAEGLIRLRASHQAGLLVLELSDDGNGVDLERLRGTIVDRHLSPLETALR
LSEEELLTFLFLPGFSLRDKVTEVSGRGVGLDAVQHMVRQLRGAVVLEQTAGQGSRFHLE
VPLTLSVVRSLVVEVGEEAYAFPLAHIERMCDLSPDDIVQLEGRQHFWHEGRHVGLVAAS
QLLQRPPGQGSQETLKVVVIRERDAVYGIAVERFIGERTLVVLPLDDRLGKVQDISAGAL
LDDGSVVLIVDVEDMLRSVDKLLNTGRLERIARRTQQTLEAPRKRILVVDDSLTVRELQR
KLLLNRGYEVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVTLLRRDTRLQSLPV
MVVSYKDREEDRRRGLDAGADYYLAKASFHDDALLDAVVELIGGARA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaccagatgcgcgatgcctcgctgctggagctgttcagcctggaagccgac
gcccagacccaggtgctcagcgccggcctgctggccctggagcgcaacccgacccaggcc
gaccagctcgaagcctgcatgcgcgccgcccattccctgaagggcgcggcgcggattgtc
ggggtggacgcgggggtcagcgtggcccacgtgatggaagattgcctggtcagcgcccag
gaaagccgcttgtacctgctgccggaacatatcgacgcactgctgcaaggcaccgatttg
ctgatgcgcattgccacgccgggcaacaccgtgggcccggcggacatcgagtcctatgtg
gcattgatggagcggttgctcgatccgtcgcagaaagtcgcgccgcccactgcgccaaag
cctgcgccgccgcccacacccgcgccagaacctgaattgtcgatggaagcgctgctgacc
ctgccgccggagcccgaacccgcgccgccggtcagtgccgaactgccacgccaaaataag
cgcatgaccgaaggcggagagcgggtgttgcgggtgaccgccgaacgcttgaacagcctg
ttggacctgtccagcaagtccctggtggaaacccagcggctcaagccttacctcgccagc
ttgcaacgcctcaagcgcatccagagcaacagcgcccgcgccctggaaaacctcgacggc
cacctcaagaccgtcgacctgagcctggaggcccaggaagcgctggctgatacccgccgc
ctgttgagcgaagcccaggcgctgctcgcggaaaaaaccgccgaaatcgacgagttcggc
tggcaggccgggcaacgcgcccaagtcttgtacgacacggcgctggcgtgccgcatgcgg
ccgtttgccgacgtgctggccgggcaggtgcgcatggtgcgtgacctgggccgcagcctt
ggtaaacaggtacgcctggaaatcgaaggcgagaaaacccaggtcgaccgcgatgtgctg
gaaaaactcgaagcgccgctgacccatttactgcgcaatgctgtggaccacggcattgaa
atgcccgagcaacgcctgctggccggcaaaccggctgaaggcctgatccgcctgcgggcg
tctcaccaggccggcttgctggtgctggagttgagcgacgacggtaacggtgtcgacctg
gagcgcctgcgcggcaccatcgtcgatcggcatttgtcgccgctggaaaccgccctgcgc
ctgagcgaagaggaactgctcacgttcctgttcctgccggggttcagcctgcgggacaag
gtcaccgaggtctcggggcgcggggtcggcctggatgcggtgcagcatatggtgcgccag
ttgcgcggcgcggtggtgctggagcagacggcggggcagggcagtcgcttccacctggag
gtgccgttgaccctgtcggtagtgcgcagcctggtggtggaagttggcgaagaggcctac
gccttcccgctggcccacatcgagcgcatgtgcgatctttcgcccgacgacatcgtgcaa
ctggaaggccgccagcatttctggcacgaaggccggcatgtcggcctggtcgccgccagc
cagttgctgcagcgcccgccggggcagggcagtcaggaaaccctgaaggtcgtggtgatc
cgcgagcgcgatgcggtctacgggattgccgtggagcgttttatcggcgaacgcacgctg
gtggtattacccctggacgaccggttgggcaaggtccaggacatctccgccggagcgttg
ctcgatgacggttcggtggtgctgatcgtcgacgtcgaagacatgctgcgatcggtggac
aaactgctgaataccggtcgtctggagcgcatcgcccgacgcacccagcaaaccctcgaa
gcaccgcgcaagcgtattctggtggtggatgactcgctgaccgtgcgtgagctgcaacgc
aaattgttacttaatcgcggttatgaagtggccgtggcagtcgatggcatggatggctgg
aacgcgctgcgctccgaagacttcgacctgctgatcacggacattgatatgcctcgcatg
gacggtattgaattggtcacactcttgcgccgtgatactcgcctgcaatccctgccggtg
atggttgtttcctacaaggatcgggaagaagaccgtcgtcgtggactggacgccggcgcc
gactattatctagccaaggccagcttccatgacgacgcgctgttggacgcggtggtggag
ctgatcggaggagcacgggcatga
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