Pseudomonas sp. SXM-1: DCC84_06145
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Entry
DCC84_06145 CDS
T11095
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
pssx Pseudomonas sp. SXM-1
Module
pssx_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_06145
01504 Antimicrobial resistance genes [BR:
pssx01504
]
DCC84_06145
Transporters [BR:
pssx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DCC84_06145
Antimicrobial resistance genes [BR:
pssx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DCC84_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QBQ09345
LinkDB
All DBs
Position
1326508..1329573
Genome browser
AA seq
1021 aa
AA seq
DB search
MGFNLSEWALRNRQIVLFLMILLAVVGTLSYTKLGQSEDPPFTFKAMVIKTNWPGATAQE
VSRQVTERIEKKLMETGDYERIVSFSRPGESQVTFMARDSMHSAEIPDLWYQVRKKISDI
RQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVPDVGKVELL
GLQDEKIWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPSERVQLRVSGNFKTV
KEIRDFPIRVGDRTFRIGDVAEIHRGFNDPPAPRMRYMGADAIGLAVAMRDGGDILVLGK
ALEGEFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTG
MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD
RLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAV
MFVPYLGEKLLPDLAKIHAAKHGTDGPDPYGTPFYQRVRRLVEWCVRRRKTVIVLTLLLF
IGSVALFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADQVKRLEALLKEHAGIENYVA
YVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIEERESLRTWLIETLNEQFPDLRSRVTRL
ENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENTHVVNVHLDWEEPSKIVYLNVDQD
RARALGVSTANLSKFLQSSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLAVPTD
NGKSVALSQIATLEYGFEEGIIWHRNRLPTVTVRADIYGKEQPATLVQQILPTLEGVRAE
LPDGYLLEVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMLQLRSFSRTAMVFLTAPLGLI
GVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEATVRR
FRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVRKEA
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaatctttccgaatgggcgttgcgtaatcgccagatcgtactgttcctgatg
atcctgctggcagtggtcggcaccttgtcctacaccaagctgggacaaagcgaagacccg
ccgtttaccttcaaggccatggtgatcaagaccaactggccaggcgctacggcccaggaa
gtgtcgcgccaggtcaccgagcgtattgaaaagaaattgatggagaccggcgactacgag
cgcatcgtctccttctcgcggcccggtgaatcccaggtcaccttcatggcccgggactcg
atgcactccgcagagatcccggacctctggtaccaggtgcgcaagaaaatcagcgatatt
cgccagaccctgccaccggatatccagggcccgtttttcaacgatgaattcggcaccacc
ttcggcaatatctacgccctgaccggcgatggctttgactacgccgtgctcaaggactac
gccgaccgcatccagattcagctgcaacgggtgccggatgtcggcaaggtcgaactgctg
ggcttgcaggacgagaagatctggatcgagctgtccaacctcaagctcgccaccctcggc
ctgccgctggcggccgtgcagcaggcgttgcaggaacagaacgcggtgtccaccgccggc
ttctttgaaaccccgagcgagcgcgtgcagttaagggtgtccggcaacttcaagaccgtt
aaggagattcgcgacttcccgatccgcgtcggtgatcgtacgttccgtatcggtgacgtg
gccgagattcatcgtggcttcaacgatccaccggcaccgcgcatgcgctacatgggcgcc
gacgccatcgggctggccgtggccatgcgtgatggtggcgacatcctggtgctgggcaag
gccctggaaggcgaattcgcacgcctgcagaagaaccttcctgccggtatggaactgcgc
aaggtgtcggaccagccggcagcggtaaaaaccagtgtcggcgaattcgtccaggtgctc
gccgaagccctggcgattgtgttgctggtgagctttttctccctgggcgtgcgcaccggc
atggtggtcgccctggcgattccgctggtgttggccatgacgtttgccaccatgtattac
ctcggcatcggcctgcacaaaatctccctcggcgcgctggtgctggcgctgggcttgctg
gtggacgatgcgatcatcgccgtggaaatgatggcgatcaaaatggagcaagggtacgac
cggctcaaggccgccagtttcgcctggaccagcacagccttcccgatgctcaccggcacc
ctgatcacggccgcgggtttcctgccgattgccacggcgcaatcgagcaccggtgaatac
acccgctcgatcttccaggtggtgaccattgcgctgctggcctcgtgggtcgccgccgtg
atgttcgtgccgtacctgggggaaaaactcctgccggacctggcgaagattcatgcggcc
aagcatggcaccgacgggccggatccctacggcacacccttctatcagcgcgtaagacgc
ctggtggaatggtgcgtgcgtcggcgcaagacggtgatcgtcctgaccttgctgctgttt
atcggctcggtggcgctgttccgctttgtgccccagcagttcttcccggcttccgggcga
ctggaactgatggtcgacctgaaactggctgaaggcgcgtccctgagcaatacggctgac
caggtcaaacgccttgaagccttgctcaaggaacatgcaggtattgaaaattatgtggcc
tacgtcggtaccggttcgccacgtttctacctgccgctggaccagcaactgccggccgcc
agctttgcccagtttgtggtgttggccaagaccatcgaggagcgcgaaagcttgcgcacc
tggctgatcgaaaccctcaacgaacaattcccggacctgcgttcgcgggttacgcggctt
gaaaacggcccgccggttggctaccccgtgcagttccgggtaacgggcgagcacatcgaa
gaagtccgggccctggcgcggaaagtggcggccaaggttcgcgaaaatacccacgtggtc
aacgtgcacctggactgggaagaaccgagcaagatcgtctacctcaacgttgaccaggac
cgcgcccgtgccctcggcgtgagcaccgccaacctgtcgaaattcctccagagttccctc
acgggctccagcgtcagccagtaccgcgaggacaacgagttgatcgaaatcctgctgcgc
ggcacggtgcatgagcgcaccgagctgtcgctgctgccaagcctggcggtgccgaccgac
aacggcaagagcgtggcgctgtcgcagatcgcgaccctggaatacggctttgaggaaggc
atcatctggcaccgtaatcgcctgccgaccgtgaccgttcgcgccgatatctacggcaag
gaacaaccggccaccctggtgcagcagatcctgccgaccctcgaaggcgtgcgcgctgaa
ctgccggacggctacctgctggaagttggcggcacggtcgaggattccgcccgtgggcag
aactcggtcaaggccggtgtgccgctgtttatcgtggtggtgctgaccttgctgatgctg
caattgcgcagcttctcccgcaccgcgatggtgtttctcacggcgcccttgggcctgatc
ggggtgacactgttcctgctggtgttccgccagccctttgggttcgtggcgatgctgggg
accatcgcgctgtcgggaatgatcatgcgtaactcggtgattctggtggaccagatcgag
caggacatcaaggccggcctggctccctggcaggcgattatcgaggcgaccgtgcggcgc
ttccggccgattgtgctgacggcgctggcggccgtactggcgatgatcccgctgtcccgc
agcgtgttcttcgggccgatggccgtggcgatcatgggcggcttgattgttgcgacggca
ttgacgctgttgttcctgcccgcgctgtatgcggcgtggtttcgggtccgcaaggaggcg
gtgtaa
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