Pseudomonas sp. SXM-1: DCC84_08740
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Entry
DCC84_08740 CDS
T11095
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00071
Fatty acid degradation
pssx00280
Valine, leucine and isoleucine degradation
pssx00310
Lysine degradation
pssx00362
Benzoate degradation
pssx00380
Tryptophan metabolism
pssx00410
beta-Alanine metabolism
pssx00640
Propanoate metabolism
pssx00650
Butanoate metabolism
pssx00907
Pinene, camphor and geraniol degradation
pssx00930
Caprolactam degradation
pssx01100
Metabolic pathways
pssx01110
Biosynthesis of secondary metabolites
pssx01120
Microbial metabolism in diverse environments
pssx01200
Carbon metabolism
pssx01212
Fatty acid metabolism
Module
pssx_M00087
beta-Oxidation
pssx_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DCC84_08740 (fadB)
00650 Butanoate metabolism
DCC84_08740 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DCC84_08740 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DCC84_08740 (fadB)
00310 Lysine degradation
DCC84_08740 (fadB)
00380 Tryptophan metabolism
DCC84_08740 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DCC84_08740 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DCC84_08740 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DCC84_08740 (fadB)
00930 Caprolactam degradation
DCC84_08740 (fadB)
Enzymes [BR:
pssx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DCC84_08740 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DCC84_08740 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DCC84_08740 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DCC84_08740 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBQ09831
LinkDB
All DBs
Position
1865019..1867166
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIVNWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtctccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagcttgtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaacgtgccgaccgttgccgcgatcaatggcatcgccctgggcggcggtctggaa
atgtgcctggccgccgacttccgcgtgatgtctgccaccgcgaaaatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcatcatcggt
gccgacaatgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgccgtggatgctgtggtggctcccgacaagctggcagaagccgcgctgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccaaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtcgttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaggccgcgaacttcggtcgcgacaaagccctggaagtcgaagctgccggcttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgctcgcgacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcagggtctggcagaagccgcgaagctg
ctggtaggccgcgttgataaaggccgcatgactgcagcgaaaatggctgaagtgcttaac
ggcattcgtccgaccctgtcctacggtgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactggctgaagttgaagcccaggtgaaa
gaagacacgatcctggcgtccaacacctcgaccatttccatcaccttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaatgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtaatggctgaaggcttc
ccggatcgcatgaaagacgaccgccgctcggcgatcgacgcgctctacgaagccaagcgc
ctgggccagaagaatggcaagggtttctacgcctacgagaccgacaagaagggcaagcag
aagaaagtggccgacccatcggttcacgaagtactcgcgccggtcatctacgaacagcgt
gaagtgtccgacgaggacatcgtcaactggatgatgatcgccctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgttgaaaccgcagccgaggccgacatgggcctggtctac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattccatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatctgggcccgctgtaccacccgact
gcgaagctgcgcgagatggccaagaacggccagagcttcttcggttaa
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