Pseudomonas sp. SXM-1: DCC84_09140
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Entry
DCC84_09140 CDS
T11095
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssx03032
]
DCC84_09140 (gyrA)
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_09140 (gyrA)
Enzymes [BR:
pssx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DCC84_09140 (gyrA)
DNA replication proteins [BR:
pssx03032
]
Prokaryotic type
DNA Topoisomerases
DCC84_09140 (gyrA)
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCC84_09140 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBQ09905
LinkDB
All DBs
Position
1953195..1955858
Genome browser
AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVDEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSEILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEGIALEGQVIGDADDGVDEPTLDAAADEEEPQE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcacaggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagatggccagggcaacttcggttcggtcgacggcgacaacgctgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggctgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgttggtcaacggctccagcggtatcgccgtgggcatggccacc
aacatcccgccacacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcagtacatcccgggtccggacttcccgaccgcc
gcgatcatcaacggtcgtgccggcatcatcgaagcctaccgtaccggtcgcggccgcatt
tacatgcgtgcccgctcgatcatcgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgaactcccttaccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaagctggaaggcatcaccgagctgcgcgacgagtctgacaaggac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaaagcgtattcggtatcaacgtggtagcgctgatcgac
ggccgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtgcgtcaccgccgc
gaagtggtaacccgccgtaccgtattcgaactgcgcaaggcccgtgaacgcggccacatc
ctggaaggccaggctgttgcgctgtcgaacatcgacccggtcatcgccctgatcaaggcc
tcgccgacgccgtcggaagccaaggaagcgctgatcaagatgccgtgggaatccagcgcc
gtagtagcgatggtggaacgtgccggtgccgattcgtgccgtccggagactctggaccca
caatacggcctgcgcgacggcaagtatttcctgtccccggaacaggcccaggccattctg
gaactgcgtctgcaccgtctgaccggcctggaacacgagaaactgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgatgtgcgccgcacc
gagattctcgacgcccgtctcgacctgaccctgggtgacatgatcccggaagaggatcgc
gtcgtgaccatttcccacggtggctatgccaagacccagcctctggcggcgtaccaggcc
cagcgtcgtggcggtaaaggcaaatcggctaccggcgtcaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaatcccggaagcgtcccgcgctgcccgtggtcgtccgctg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgctgccggtagacgag
tacaccgaaggtcacttcatcttcatggccactgcgaaaggcaccgtgaagaagaccccg
ctggaatccttcagccgtcaacgcagcgtgggcctgatcgccctcgaactggacgaaggc
gacgtattgatcagcgcggccatcactgacggcgagcgtgaagtcatgctgttctccgac
ggcggcaaggtcacgcgcttcaaggagtccgacgttcgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagcgagatcctcacggcatcggcccgcggctacggcaagcgtacggccatcagc
gagttccccgagtacaagcgtggcggccagggcgttatcgccatggtcagcaacgatcgc
aacggccgcctggtcggcgcggtccaggtgctggatggtgaggaaatcatgctgatttcc
gaccagggcactctggtacgtacccgggttgatgaagtgtcgagcctggggcgtaacacc
cagggcgtgaccttgatcaagctggccagcgacgaaacgttggtaggcctggagcgtgtc
caggagccatcggaagtcgaaggcgaggagctggaaggtgaagaggggattgcactcgag
gggcaagtgatcggcgatgccgatgacggcgtcgacgagccaacactcgacgctgccgca
gacgaagaagaaccgcaggaataa
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