Pseudomonas sp. SXM-1: DCC84_09175
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Entry
DCC84_09175 CDS
T11095
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssx03032
]
DCC84_09175 (ihfB)
03036 Chromosome and associated proteins [BR:
pssx03036
]
DCC84_09175 (ihfB)
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_09175 (ihfB)
DNA replication proteins [BR:
pssx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DCC84_09175 (ihfB)
Chromosome and associated proteins [BR:
pssx03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DCC84_09175 (ihfB)
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DCC84_09175 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QBQ09912
LinkDB
All DBs
Position
1964457..1964753
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGV
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgtggagctggccatcaagaccatgcttgagcagatgtcccaatgtctggctaccggc
gatcggattgaaattcgtgggtttggtagcttctcgctgcactatcgtgcgcctcgtgtg
gggcgcaacccaaaaaccgggcagtccgtcagccttgacggcaagttcgtgcctcatttc
aagccgggcaaggaattgcgcgatcgggtgaacgaagacgaagaagaaggcgtctga
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integrated database retrieval system
