Pseudomonas sp. SXM-1: DCC84_09615
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Entry
DCC84_09615 CDS
T11095
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02020
Two-component system
pssx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCC84_09615
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_09615
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pssx01001
]
DCC84_09615
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pssx02022
]
DCC84_09615
Enzymes [BR:
pssx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
DCC84_09615
Protein kinases [BR:
pssx01001
]
Histidine kinases
Other
DCC84_09615
Two-component system [BR:
pssx02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
DCC84_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
CHASE8
Motif
Other DBs
NCBI-ProteinID:
QBQ09991
LinkDB
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Position
complement(2047773..2050082)
Genome browser
AA seq
769 aa
AA seq
DB search
MDIKFAHRLSYKQARLTVLVGFVLGTLLSLIQIGIDYASEDASINREIRALIEISHNPAS
RIAYNIDAELAQELTLGLLHSPAITHAQLIDNNGLVLADVHRPRKESTYRPISDFLFGAN
RQFEDRLYLAHMPNDSLGVLRLDVDTYAFGSRFLHRAEITLLNGFARSLILTGILLALFY
VMLTKPLVRIIRELSSRKHERLDCPPGHEHDEIGVLVNVANQQFENMETEIQQRRHAENR
LTEYLGQLEDIVSARTTELKAINHRLTLSNDELEAAKMTALGMAQARAAFLANMSHEIRT
PLNGLLGMIALSLDSPLNAEQRQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELESIPF
DLGSLVEDTANLLSQNAAPSVELTCLIDPQFPAQVLGDPTRVRQIVSNLLSNALKFTRFG
RVDVRLSAQAGRVRIEVCDTGIGIAQDAQVKIFQPFTQAGAGITRQFGGTGLGLALTHNL
CEAMKGRLSISSEAGFGSQFCADLPLPTHLPAVRLAPLAGDVIAITSTSSGLAELLTSLL
PSWGLAPRCYSIDDDLSGQNPDLLITDCPECLFRLRPMITAPILVVTAYGNFMPSEEVAA
LAPLQQQARPLSRTALYQVLQRNLRTDPDLVLDLIQLETGPLAHRARILLVEDNPVNQLV
AKGMLGKLGCEVIVAAHGGEALKLLEEQGFDMVLMDCNMPVMDGYEASRQIRRSGRWPDL
PIVALTANAMSEERERCRAAGMNDYLAKPFRREELKALLDLWVPTTTSL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagttcgcccaccgcttgtcttataaacaagccagactgacagtgctggtc
ggattcgtcttgggaaccttgctcagcctgatacagattgggattgattatgccagcgaa
gacgcttccatcaaccgggaaatacgtgcgctgattgaaatcagccataacccggcttcg
cgcatcgcctacaacatcgacgccgagctggcccaggaactgacgctgggcctgctgcac
tcccccgccatcacccatgcacaactgatcgacaacaacggtttggtgctggccgatgtc
catcgcccgcgcaaggaaagcacctaccggcccatcagcgacttcctgtttggcgccaac
cgccaattcgaagatcggctctacctcgcccacatgcccaacgattccctcggtgtactg
cgtcttgacgtagacacctacgcgttcggcagccgcttcctgcaccgcgccgagatcacc
ctgctcaacggcttcgcccgcagcctgatcctcaccggcattctgttggcgcttttctac
gtgatgctgaccaagccgctggtgcgcattatccgcgagctgagctcacgcaagcacgag
cgcctggactgcccgccggggcacgagcacgacgagatcggcgtactggtcaacgtcgcc
aaccaacagtttgaaaacatggagactgaaatccagcaacgccggcacgctgaaaatcgc
ctgaccgaatacctcggccaactggaagacatcgtctccgcccgcaccaccgagctcaag
gcgatcaatcatcggttgacgctgtcgaacgacgagctggaagcggcgaagatgacggcc
ctgggcatggcccaggcacgggcggcgttcctggccaacatgagccatgaaatccgtaca
ccgctgaacggcctgctggggatgatcgccctctccctcgacagcccgctgaacgccgag
caacgccagcaactgtcgatcgcccatgactccggcaaagtactggtggagctactcaac
gatatcctcgacctgtcgaagttcgacgccggccaactggaactggaaagcatcccgttc
gacctcggttcactggttgaagacaccgccaacctgctctcgcaaaacgccgcgcccagc
gtggagctgacgtgcctgatcgacccgcagtttcccgcccaggtgctgggcgacccgacg
cgggtacggcagattgtcagcaatttgctgtccaacgccctgaagttcacacgtttcggc
cgggtggatgtacgcctcagtgcccaggccggccgggtcaggatcgaggtgtgcgacacc
ggtatcgggatcgcccaggatgcccaggtcaagattttccagccgttcacccaagccggt
gcgggcatcacccgccagttcggcgggacaggcctgggcctggcgctgacccacaacctg
tgcgaagccatgaaaggccgcctgagcatcagctcggaagctggctttggcagccagttc
tgtgccgacctgcccttgccgacccacttgccggcggtgcgcctggcgcctttggctgga
gatgtaatcgccatcaccagcaccagcagcgggctggcagaactcctcaccagcctgctg
ccgagttggggcctggctccgcgctgttattccatcgacgatgacttgagcgggcagaat
cccgacctgctgatcaccgactgccccgaatgcctgttccgcctgcgcccgatgatcacc
gccccgatcctggtggtaaccgcctacggcaacttcatgcccagcgaagaagtcgcggcc
ctggcccccttgcagcaacaggcccgccccctgagccgcaccgcgctgtaccaggtcctg
caacgcaacttgcgcaccgatccggacctggtcctggacctgatccagctggaaaccggc
cccctcgcccaccgggcgcgcatcctgctggtggaggacaacccggtcaatcaactggtg
gccaagggcatgctcggcaagctcgggtgcgaggtgatcgtcgccgcccacggtggtgaa
gccctcaagctgctggaagagcaaggcttcgacatggtgttgatggactgcaatatgccg
gtgatggatggctatgaggccagtcggcagatccgccgcagcgggcgctggccggacttg
ccgatcgtcgccttgacggccaatgccatgtccgaggaacgcgagcgctgccgggctgcg
ggcatgaacgattacctggcaaagccgtttcgccgggaagaactcaaggccttgctcgat
ctgtgggtgccgactacgacaagtctttga
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