Pseudomonas sp. SXM-1: DCC84_12255
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Entry
DCC84_12255 CDS
T11095
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCC84_12255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_12255
Transporters [BR:
pssx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DCC84_12255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
nSTAND3
AAA_29
nSTAND1
NACHT
RsgA_GTPase
TsaE
AAA_16
AAA_19
FtsK_SpoIIIE
AIG1
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
QBQ10455
LinkDB
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Position
2584789..2586504
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AA seq
571 aa
AA seq
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MSDQKRLIVEGLSIEFAGQSVVRNLSFTLEPGKTLALVGESGSGKSVTARSLIGLAGAGA
KVTARTLSYDGVDLLSLSERGWRRLRGNGIGFVLQDALVSLDPLRPVGKEILEVLETHRW
GDRRSRGERVIELLDLVGVPEPQLRARQRPDQLSGGLRQRALIASALALNPGLVIADEPT
TALDATVQAQILQVLQQIKARGDSLLIISHDLAVVAQLADEVLVLRHGEVVEQGPMDQVL
LNPRHAYTRSLLDAVPAEHARGTRLSPERSNAVAQPRPGADSPVLLKASGLGKRYIGPDQ
QSRQVVDNVSFELRAGRTLGIVGESGSGKTTVARIALGLLQPDAGEVRFLDQPWAAAGTE
RVEEKTRRVHRRDISVIYQDPLSSFDPRWTVGQILSDALDVAGIDAEQQAARVTQLLDQV
RLAPQLAERRPLQLSGGQRQRVAIARAIASNPKVIICDEPVSALDVSVQAQVLDLLADLQ
ASLGLAYLFISHDLGVIRHVSDEVLVMRHGQVVESASVETMFESPQHEYTRRLLGAVPRL
PGSGTQLVVPALEPENPGWLFDESRLWKIAI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccagaaacgcttgatcgttgaagggctgtccatcgagtttgccgggcagtcg
gtggtgcgcaatctgtctttcaccctggagcctggcaagaccctggcgctggtgggcgaa
tccggctccggtaaaagcgtcaccgcccgcagcctgatcggcctggcgggtgcgggcgcg
aaggttacggcgcgcaccttgagctatgacggtgtggatttgctcagcctgtcggaacgc
ggctggcgtcgtttgcgtggcaatggcatcggcttcgtgttgcaggatgcactggtgtcc
ctcgacccgttgcggccggtgggcaaggaaattctcgaagtgctggagacccatcgctgg
ggcgaccgtcgcagccgtggcgaacgcgtcatcgaactgctggacctggtgggcgtaccc
gaaccgcaactgcgtgcgcgccagcgtcccgatcaactctccggcggcctgcgccagcgt
gcgctgattgccagcgcactcgcattgaaccccggcctggtgatcgccgatgaaccgacc
acggcgctggatgccacggtgcaggcgcagatcctgcaggtgttgcagcagatcaaggcc
cgtggcgattcgctgctgatcatcagccatgacctggcagtggtcgcgcaattggcggat
gaggtgctggtgctgcgccacggcgaagtggtggagcaggggccgatggatcaggtgctg
ctcaacccgcgccacgcctacacccgctcgctgctggatgcggtgcccgccgaacatgcc
cggggcacacgcttgtcgccggagcgcagcaacgctgtggcgcaaccacggcccggcgcg
gattcgccggtgttgctcaaggcctccgggctgggcaaacggtatatcggccccgatcaa
cagtcgcgtcaggtggtggataacgtcagcttcgagctgcgcgccggccgcaccctaggc
atcgtcggtgaatccggctcgggcaaaaccacggtggcgcgtatcgccctcggcttgctg
caaccggatgccggtgaggtgcgttttctcgaccagccatgggccgcggcaggtaccgag
cgggtcgaggaaaagacccgccgtgtgcatcgccgggatatcagcgtgatttatcaggac
ccgctgagttcgttcgacccgcgctggacggtggggcagatcctcagtgatgcgctggac
gttgccggtatcgacgccgagcaacaggcggcccgcgtgacacagttgctcgaccaggta
cgcctggcgccgcaattggccgagcgccgaccgttgcaactgtcgggcgggcagcgccag
cgcgtggcgattgcccgggcgattgccagcaaccccaaagtgattatctgcgacgagccg
gtgtcggcgctggacgtgtcggtgcaggcccaggtcctggatctgctggccgacctgcaa
gcctcgctgggcctggcctacctgtttatctcccacgacctgggggtgattcgccacgtc
agcgacgaagtgttggtgatgcgccacggccaggtggtggaaagcgccagcgtcgagacg
atgtttgaatcgccccagcacgaatacacccggcgcctgctgggcgcggtgccacgcctg
cccggcagtggcacgcagttggtggtgccggccctggagccggaaaaccccggctggctg
tttgatgaatcgcgcctgtggaaaatcgccatctag
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