Pseudomonas sp. SXM-1: DCC84_12485
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Entry
DCC84_12485 CDS
T11095
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssx03000
]
DCC84_12485
Transcription factors [BR:
pssx03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DCC84_12485
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QBQ10500
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Position
2638118..2639158
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AA seq
346 aa
AA seq
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MSEDKPRKRRGAGRVTLNTVARQAGVSAITVSRYFNQPEQVSPERRERIAAVVAELGYVP
NLVAGGLASARGRIVAMVIPNISGPIFANTIQGFSDTLSRHGYQLLLASSYFSAEQEENA
VRAFLGWSPAALVLTSRFHSAGTEKMIAEADIPVVETWDYQPEREPLQIGFSHYEVGVTA
ARYLHGKGYRRIAFVQNSAPGDFSALERRDGYSATLIELGMQPWVFAPDADRAPFEAGKQ
AMQALMSAAIPPDAIIFANDNLAAGGLLAGQRAGLEIPKDCAVLGFGDYPFAEMLLPSLS
TIKPPALEIGVLAATRVLESLGVLPVEDEVQRLNLLECRLIERESA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagacaaaccccggaaacgccgtggtgccggccgcgtcaccttgaataccgtg
gcgcgccaggccggtgtgtcagcgattaccgtgtcgcgctatttcaaccagccggagcag
gtctcgcccgaacgccgcgaacgcatcgcggcggtggttgccgaattgggctatgtgccg
aacctggtggcgggtgggctggcgtcggcgcggggcaggatcgtcgcgatggtgattcca
aacatctccgggccgatcttcgccaataccatccagggcttcagcgataccctcagccgc
cacggctaccaattgctgctggcgtccagttacttcagcgccgagcaggaagaaaatgca
gtgcgcgcgtttctcggctggtccccggcggcattggtgctcaccagccgcttccatagc
gcgggcaccgagaagatgatcgccgaggcggatatcccggtggttgaaacctgggattac
caacccgagcgggagccgttgcagattggcttctcgcattacgaggtgggcgtgacggct
gcgcgctacctgcatggcaagggttatcggcgcatcgcgttcgtacagaacagcgcgccg
ggggacttcagtgcactggaacgccgggatggctacagcgcgaccctgattgagctgggc
atgcagccgtgggtgtttgccccggacgccgatcgcgcaccgtttgaggcgggcaagcaa
gcgatgcaggcattgatgagtgccgccattccaccggacgcaatcatcttcgccaatgac
aacctggccgccggtggcctgctggccgggcaacgggcaggtctggagatccccaaggat
tgcgccgtgctcggctttggtgattacccgtttgccgaaatgctcttgcccagtctcagc
accatcaagccgcccgccctggagatcggtgtgctggcggcgacgcgggtactggaaagc
ctgggcgtgttgccggttgaggatgaggtgcagcgcttgaacctgctggagtgccgcttg
atcgagcgcgagagcgcctga
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