Pseudomonas sp. SXM-1: DCC84_12720
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Entry
DCC84_12720 CDS
T11095
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssx03000
]
DCC84_12720
Transcription factors [BR:
pssx03000
]
Prokaryotic type
Helix-turn-helix
Other families
DCC84_12720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_2
HTH_23
PAS_4
HTH_30
AAA_5
HTH_50
AAA_16
HVO_A0261_N
HTH_22
TTHA0829-like_ACT
Motif
Other DBs
NCBI-ProteinID:
QBQ10542
LinkDB
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Position
complement(2684889..2686754)
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AA seq
621 aa
AA seq
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MLAVNSKDHVDCVSRVVRNADRLPQAPVPSLIFDSWRRSLEQHHLDPGSLQGPRILTSTL
LKECRERAELFMRIASEEVGQIHNRVRHADYCVMLTDAQGQTIDHRVDAGIRNDCRKAGL
YLGTCWSEAEEGTCGVATVLTSKAAVTVHKRDHFRAAFIGLTCSAAPIFDPLGNLLGVMD
ASALKSPDDRRSQHLVRQMVAQSARAIENAFFMHSARQHWVLQAHSTPGYVDSQPDMLLA
WDQDGRLQALNSKARQALRLRFGQLPEHIGEVFDLDALRAVTDQSTQQLHWLGEPGALQV
RVSAPRRKAARTTVSSSHQVDPRVEEHLRLAVRVKDRNLPVLVQGETGAGKEVFARQLHE
RSARRDGPFVAVNCAAIPENLIESELFGYVAGAFTGASSKGMTGLLLQADGGTLFLDEIG
DMPLALQTRLLRVMAEGEVAPLGGAKTRAVDIQVICASHRDLAALVSAGSFREDLYFRLG
CARFCVPPLRERMDKLALINRLLEQEARHSGVAVGIAAAALESLLGYAWPGNVRQLRHVL
AYACAVCDGGTIQLADLPVEVRGDAVAVETSESVSPERQLVLDALIRHRWKPLAAAQALG
ISRATLYRRVNQLGIDMPGKH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtgaactccaaggaccatgtcgactgtgtcagccgcgtggtacgcaacgcc
gaccgcctgccccaggctccggtgccgtcgctgatttttgattcctggcgccgctccttg
gagcagcaccacctcgaccccggttccctgcaagggccgcgcatcctcaccagcaccctg
ctcaaggaatgccgcgaacgcgccgagctgttcatgcgcatcgccagtgaggaagtcggg
cagattcacaaccgggtgcgccacgccgattactgcgtgatgcttaccgacgcccagggc
cagaccatcgaccatcgtgtggacgccggcattcgtaacgactgccgcaaggccggcctg
tacctgggcacctgctggtcggaagccgaggaaggcacctgtggcgtggccacggtgctg
accagcaaggccgcggtcaccgtgcacaagcgcgaccactttcgtgcggcgtttatcggc
ctgacctgctctgccgcccccatctttgatcccctgggcaacctgctgggcgtgatggac
gcctccgccctcaaatcgccggatgaccggcgcagccagcacctggttcggcagatggtg
gcgcaaagcgcgcgggccatcgagaacgcgtttttcatgcacagcgcccggcaacattgg
gtgttgcaggcccacagcacgcccggttacgtcgacagccagcccgacatgctgctggcg
tgggatcaggatgggcggctgcaagccttgaacagcaaggcgcggcaggccctgaggttg
cgcttcgggcaattgccggagcatatcggcgaagtgtttgacctggacgcgttgcgcgcc
gtgaccgatcaatcgacgcagcagttgcattggctcggcgagccgggggcgttgcaggta
cgggtcagcgcgccgcggcgtaaggctgcacgtacgacggtgtcttcgagtcatcaggta
gacccgcgagtagaagaacatctgcgcctggccgtgcgggtcaaggaccgcaacctgccg
gtgctggtccagggcgaaaccggcgccggcaaggaagtgtttgcccgccagttgcatgaa
cgcagtgcccgtcgcgacggaccctttgtggcggtgaactgcgcggcgatcccggaaaac
ctgatcgagagcgaactgttcggctacgtggccggggcatttaccggtgcctccagcaag
ggcatgaccgggctgctgttgcaggccgatggcggcacgttgtttctcgacgagatcggc
gacatgccgctggcgttgcagacgcgactgctgcgggtaatggccgaaggtgaagtggcg
ccgctgggcggggcaaaaacccgggcggtggatatccaggtgatctgcgccagccatcgg
gacttggcggcgctggtgagtgctggaagctttcgcgaggatttgtatttccggttgggc
tgtgcgcggttctgtgtgccgccattgcgcgagcgcatggacaaactggcattgatcaat
cggcttctggagcaggaggcgcggcacagcggtgttgcggtcgggatcgcggcagcggcg
ctggagtcgctgctgggttatgcctggccggggaatgtgcggcaactgcggcatgtattg
gcatacgcctgtgcggtgtgcgacggcgggacaattcaactggcggatttgccggtggaa
gttcgcggtgacgcggttgcggtggaaacatcggaaagcgtcagcccggaacggcagttg
gtgctggacgcactgattcggcatcggtggaagccgctggcggcggcgcaggcgttgggg
atttccagggcgaccttgtatcggcgggttaaccagctgggtatcgacatgcccggcaag
cactga
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