Pseudomonas sp. SXM-1: DCC84_16510
Help
Entry
DCC84_16510 CDS
T11095
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssx03032
]
DCC84_16510
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_16510
Enzymes [BR:
pssx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DCC84_16510
DNA replication proteins [BR:
pssx03032
]
Prokaryotic type
DNA Topoisomerases
DCC84_16510
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCC84_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBQ11229
LinkDB
All DBs
Position
complement(3439233..3440261)
Genome browser
AA seq
342 aa
AA seq
DB search
MPDPALLADLPRDLHYVDDTQPGISRKKLRGKFQYFKADGTRITDADEIKRINALAVPPA
YTDVWICADPRGHLQATGRDARGRKQYRYHPRWREVRDTDKYSRLQQFGSALPKLRKQLE
AQIEAPGFNREKVLATVVLLLDATLIRVGNTQYARDNRSYGLTTLRTRHVDIKGSEILFQ
FRGKSGIEHQISVKDRRLATVIKRCLELPGQNLFQYLDENGERHTVSSTDVNAYLHTLTG
ADFTAKDYRTWAGSALALAVLRELEWQPESDAKKHVVEMVKNVAKQLGNTPAVCRKCYIH
PAVLEHFSLGELAKLPKPRVRKGLKAEEVGLAMFLEQLAERL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcctgcgttgcttgccgacctgccccgcgacctgcattacgtcgacgatacc
cagcccgggatctcccgcaaaaagctgcggggcaaattccaatacttcaaggccgacggc
acacgcataaccgatgccgacgaaatcaaacgcatcaacgcactggcagtgccgccggcc
tataccgatgtgtggatctgcgccgacccgcgcggccatctgcaagccaccgggcgggat
gcccgggggcgcaagcagtaccgctaccacccgcgctggcgcgaggtgcgcgacaccgac
aaatactcccggctgcaacagttcggcagcgcgctgcccaagttgcgcaaacagttggaa
gcacagatcgaggcgccagggttcaatcgggaaaaggtcctggccacggtggtgctgctg
ctcgacgccaccctgatccgcgtcggcaatacccaatatgcccgcgacaaccgctcctac
ggcctgaccaccctgcgcacccgccatgtggatatcaagggcagtgagatcctgttccag
tttcgcggcaagagcggcatcgagcaccagatcagcgtcaaggaccggcgcctggccacg
gtgatcaagcgttgcctggagttgccggggcagaacctgttccagtacctggacgagaac
ggcgagcgccataccgtcagttccaccgatgtgaatgcctacctgcacaccctgaccggc
gcggattttaccgccaaggactaccgcacctgggccggcagcgccctggcgctggcagtg
ctgcgcgagcttgagtggcagccggaatccgacgccaagaaacatgtggtggagatggtc
aagaacgttgccaagcaactgggcaacacgccggcggtgtgtcgcaagtgctacatccac
ccggcggtgctggagcatttcagcctgggcgaactggcgaaactgcccaagccccgagtg
cgcaaaggcttgaaagccgaggaagtcgggctggcgatgtttctggagcaactggccgaa
cgcctgtaa
DBGET
integrated database retrieval system
