Pseudomonas sp. SXM-1: DCC84_20275
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Entry
DCC84_20275 CDS
T11095
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_20275 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pssx02044
]
DCC84_20275 (tssK)
Secretion system [BR:
pssx02044
]
Type VI secretion system
Imp/Vas secretion system core components
DCC84_20275 (tssK)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QBQ11934
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Position
complement(4301066..4302394)
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AA seq
442 aa
AA seq
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MYSQKVIWQEGMLLRPQHFQQNDRYHDQQLTRRTQLLCRHAWGFLALEIDVQYLNMGKVV
ISQASGILPDGSLFELGGAMESLVLEVPVNTGKQSIYLALPLATGNCVEARRPEQIDVLA
RYKTLAVDVSDSNAGEEARRQVNCGQLDFRLLLGEQHSDPHYVKLKVAQVLSCTEEGVSL
DPDFIPSFIHLHGSGYLLSCLKEVISLLAYRGDAIAERIRANGTAAGAEVGDFLMLQLIN
RTELVLRHYLGLSQVSPETLYRTLLSILGELATFASDSKRAHFEGHYRHSDQGASFRGLM
EPIRSLLSMVLEQHAIELALQPRQYGVLVCPVSDLNLLGSATFILAASAHCDAEELRHRL
PAHLKVGPVERIRELVNLQLAGIKVKPLPVAPRQIPFHAANTYFMLELGARDIEQLKQSG
GFAFHVSGEFAELELKFWAIRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtacagccaaaaagtcatctggcaggaaggcatgttgctgcgccctcagcatttccag
caaaacgatcggtaccacgatcagcaactcacgcgccgcacccagctgttgtgccgtcac
gcctggggcttcctggccctggaaatcgatgtgcaatacctcaatatgggcaaggtcgtt
atcagccaggccagcggcatattgccggatggcagtctgttcgaactgggtggcgcgatg
gagtcgctggtgctggaggttccggtaaataccgggaagcagtcgatctacctggccttg
ccgctggccacaggtaactgtgttgaagcccgtcgacccgagcagattgatgtgttggcg
cgctacaagactcttgcggtagacgtcagcgactccaacgccggggaagaagctcgtcgt
caggtcaattgcgggcagctggattttcgcctgttgctgggggagcaacacagcgacccg
cattacgtgaagctcaaggttgcccaggtgctcagttgcactgaggagggcgtcagcctg
gaccccgattttatcccgagcttcattcacctgcatggctccggctacctgctgtcttgc
ctcaaggaagtgatcagcctgctcgcttaccggggggatgccatcgccgagcggattcgc
gccaacggtaccgccgccggcgcggaggttggcgacttcctgatgttgcaattgatcaat
cgcaccgaactggtcttgcgtcactacctgggcctgagccaggtcagccctgaaacgctg
tatcgaacattgctgtcgatcctgggtgaactcgcgacgtttgccagcgacagcaagcgt
gcgcacttcgaggggcattaccggcacagcgaccagggcgccagctttcgtggattgatg
gagccgattcgcagcctgctgtcgatggtgcttgagcagcatgccattgagctggcgctg
cagcctcgccagtacggggtgctggtgtgcccggtgagcgatctcaacctgctgggttcg
gcgaccttcattctggccgccagcgcccattgtgacgccgaggagcttcgacaccggctt
ccggcgcacctcaaggtcggccccgtggagcggattcgcgagttggtcaacctgcagttg
gcgggcatcaaggtcaagccgctgccggtggctccccggcagataccgtttcatgccgcc
aacacctatttcatgcttgaactcggtgcccgggacattgagcagttgaagcagtcggga
ggatttgccttccacgtcagcggtgaatttgccgaactggaactgaaattctgggccatc
aggaactga
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