Pseudomonas sp. SXM-1: DCC84_20325
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Entry
DCC84_20325 CDS
T11095
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_20325 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pssx02044
]
DCC84_20325 (tssB)
Secretion system [BR:
pssx02044
]
Type VI secretion system
Imp/Vas secretion system core components
DCC84_20325 (tssB)
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Paralog
GFIT
Motif
Pfam:
T6SS_VipA
TMP_C
Motif
Other DBs
NCBI-ProteinID:
QBQ11944
LinkDB
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Position
complement(4313020..4313517)
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AA seq
165 aa
AA seq
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MAKEGSVAPRERINITFKPAVGTAQEEVELPLKLLVLGDFTQREDLRKLEDRKPVGIDKN
SLDEVLAKQALGLALSVPNRLQDSAEPDELAIRVRINSMKDFNPAQLVEQIPELKKLMDL
RDALVALKGPLGNTPSFRKAIENALADDDSRKRVLAELGLDSSAV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaggttcggtagcccccagggaacgcatcaatatcacgttcaaacccgcc
gtcggcactgcgcaggaagaggtcgagctgccgttgaaattgctggtgcttggtgacttc
acccagcgtgaagacctgcgcaagctcgaagaccgcaagcccgtcggcatcgacaagaac
agcctcgacgaggtgctggccaagcaggccttgggcctggccttgagcgtccccaaccgg
ctgcaggattcagccgaacctgacgagttggcgatccgggtcaggatcaattcgatgaag
gacttcaatcctgcacagctggttgagcagatacccgagctgaaaaagctcatggacctg
cgcgatgcacttgtggcgctcaaggggccgctgggcaacacgccgagctttcgaaaggcc
attgaaaatgccctcgccgatgacgattcgcgcaagcgggtattggctgaattggggctg
gacagctccgccgtataa
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