Pseudomonas sp. SXM-1: DCC84_21000
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Entry
DCC84_21000 CDS
T11095
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_21000
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC84_21000
Archaeal homologous recombinant proteins
DCC84_21000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
Snapin_Pallidin
AAA_15
ABC_tran
nSTAND3
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QBQ12074
LinkDB
All DBs
Position
4446261..4449899
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADTDISIGDPRTLIRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQASRQSLIDLDSEQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDARDAHKHLQDQATGVTPLAPEARAELDAQLA
AAQQQLKTQQAQLKQLELQHTWLKELREWQERQQSAVEQLQQAQQHWASQGPQRLDLSRL
EQLAPQRHHFARQAELTTQLQPLAAQIQQHLEQQTALHTRQTQLQQQQADVQAALAQALK
QQADAVPLLRQAFEEQTTLAHLTRELAKRSEEKQLGEAACVEGQATLTGLLDKQKVVAER
LHRLAAELERSAALAPLSEAWSAYRDRLQQLMLIGNRLNKGQAELPQLEERATRLGEKWT
EQREALDLLYHEAGAEPHAVAEQIQLLGSLLQDNRKQHRAFEDLARLWNSHQQLDSQSQA
LTQKQTLAQQQRELLNQSGLQAKAELAVAEQTLTVTKQLLERQRLARSASVEELRGQLQD
EQPCPVCGSVEHPYHQPEAMLQSLTRHDESEEANAQQAVDVLKEKLTDLRGEVGGLIAQQ
KEFLQQQEQLASQLQALLPSLEAHPLSASLFNQDAAKRDAWLAQQLSQLSQSLTQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLIDQQRELSNDRERLDEELNAFASLLPTET
LEGLRSEPAATFMLLDQQVSQRLEQLDNQKEELAEQLQRQQAIEKEQDRQQHRQQQLETL
HKQLAEQSALQHAAEEKLAGLLGEKPSAEHWQQQLDQAVEQARQHESEANQQLQDTRNQL
IQLAADLKSLQERQQSLDTEHLALSTRLNDWRALHPELDDEGLARLVGFDEPQVAELRQQ
LQHSEKAVEQAKVLLQEREQRLKDHQALHNGNLEAEQLDDALAELNAALAIGEKDCAELR
ARQADDQRRQDANQALAAEIAKAYEEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccattcgcctgaaaaacctcgcctctttggcgggtccgtttgaaatc
gactttaccgccgagcccctggccagcgccgggctgttcgcgattaccgggcccaccggc
gccggcaaaagtaccttgctcgatgcgctgtgcctggcgctgtttggcgccgtgccgcgc
ctgggcgataccggccaggcaaaaatgccggatgccgacaccgatatttccatcggtgac
ccacgcaccctgattcgccggggcactggcggcggttatgccgaagtggattttgtcggc
gtcagtggccgtcgctaccgcgcccgctgggaagccaaccgcgcccgggacaaggccagc
ggcaagctgcaagccagccggcaaagcctgatcgacctggacagcgagcaactgctggcc
agccagaaaaccgaatacaagacccagctggaattggccctgggcctgaacttcgagcag
ttcacccgcgcggtgttgctcgcgcaaagtgagttcagcgcgttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgacacggcgctctacacccaactcggt
cgccgcgccttcgacaaggccaaggacgcccgggacgcccacaaacacctgcaggaccag
gccaccggcgtcaccccgctggcccccgaggcccgcgccgaactcgacgcacaactggcc
gccgcacagcaacagctcaagacccagcaggcgcaactcaagcaactcgagttgcagcac
acctggctgaaggaactgcgagagtggcaggagcgccaacaaagtgcggtcgagcaactg
caacaggcccagcaacactgggcaagccagggcccgcagcgcctggacctcagccgcctg
gaacaactggcgccgcaacgtcaccacttcgcccgccaggccgaactgaccacgcagctg
cagccccttgccgcgcagatccagcagcaccttgagcaacaaaccgcgttgcacacccgc
cagacccaactgcaacagcaacaggccgacgtgcaagccgccctcgcccaggccctcaag
cagcaagccgacgctgtgcccttgctgcgccaggccttcgaggagcaaaccaccctcgcc
cacttgacccgcgaactggccaaacgcagcgaagagaaacagctgggtgaagctgcctgc
gtggaaggccaggcgacgttgaccggcttgctcgacaagcagaaagttgtcgccgagcgc
ctgcaccggctcgccgcagagcttgaacgcagcgccgccctcgcgccgttgagtgaggcc
tggagcgcctaccgcgaccgcttgcaacagctgatgctgatcggcaatcgcctcaataaa
ggccaggccgaactgccacaactggaagagcgcgccacccgtctcggtgaaaaatggacc
gagcaacgcgaagcccttgacctgctgtaccacgaagccggcgccgaaccccatgcagtg
gccgaacagatccagttgctcggcagcctgctccaggacaaccgcaagcaacatcgcgcg
tttgaggacctggcgcggctgtggaacagccatcagcaactcgacagccagagccaggcc
ctgacgcaaaagcagaccctcgcccagcaacaacgcgaactgttgaaccagagcggcttg
caggccaaggccgagttggccgtcgccgaacagaccctgaccgtcaccaagcaactgctg
gagcgccagcgcctggcccgcagtgccagcgtcgaggaattgcgcggccagctgcaggat
gagcagccgtgcccggtgtgcggcagcgtcgagcacccgtatcaccagcccgaagccatg
ctgcaaagcctgacccgccacgacgaaagcgaagaagccaacgcgcagcaagccgtggat
gtgctcaaggaaaaactcactgacctgcgtggcgaagtgggcggcctgatcgcccagcaa
aaggaattcctgcaacaacaggagcaactcgccagccagttgcaggccttgctgccaagc
cttgaagcccatccgctgtcggcctcgctgttcaaccaggacgcggccaagcgcgacgcc
tggctcgcccagcaactgagccagctcagccagagcctcacccaggacgagcaacgccag
ggcgccctgctcaacctgcaacagaacgccgggcgtttgcagcaacaactgcaagccgcc
caggacgccagccaacaggcgcgccagttactgatcgaccagcaacgggaactgtccaac
gaccgcgaacgcctggacgaagaactcaacgccttcgccagcctgctccccaccgagacc
ctcgaaggcctgcgcagcgagccggcggcgaccttcatgttgctcgaccagcaggtcagc
cagcgcctggaacagctcgacaaccaaaaggaagaattggccgagcagctacagcgccag
caagccatcgagaaagagcaggaccgccagcaacaccgccagcagcagctggagactttg
cacaaacagctcgccgaacagagcgccctgcaacacgcggccgaggaaaagctcgccggc
ctgctgggcgaaaaacccagcgccgagcactggcaacagcagctggaccaggccgtcgag
caggctcgccagcatgagagcgaggccaaccagcagttgcaggacacccgcaaccagttg
atccaactggctgccgacctcaagtcgctgcaagagcgccaacaatccctggacaccgag
cacctggccctcagcacgcgcctgaacgactggcgcgccttgcacccggagctcgatgac
gaaggcctggcacggctggtgggcttcgatgaaccgcaggtggccgaactgcgccagcaa
ctgcaacacagcgaaaaagcggtcgaacaggcgaaggtgttgctgcaggagcgcgaacaa
cggctcaaggatcaccaggcgctgcacaacggcaaccttgaagccgagcagctggacgac
gccctggccgaactcaacgccgcgttggccattggcgaaaaagactgcgccgaactgcgt
gcccgccaggctgacgaccagcgccgccaggatgccaaccaggcgctggcagcagagatc
gccaaggcctacgaagaatggcaacgctgggcacgcctgaatgcactgatcggttcggcc
accggcgataccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcaccac
gccaacgtccaactgcgccaactggtgcgccgctaccgcctcaagcgcggcggcagcatg
ctcggcctgctggtactcgacacggagatgggcgacgaactgcgttcggtgcactcgttg
tccggcggcgagacgttcctggtgtcgctggccctggccttgggcctggcgtcgatggcg
tcgagcacgttgaagatcgagtcgctgtttatcgacgaaggcttcggcagtctcgacccc
gagtcgctgcaactggcgatggacgccctcgacggcttgcaggcccagggccgcaaggtc
gcggtgatttcccatgtgcaggaaatgcacgagcggattccggtgcagattcaggtcaag
cgccagggcaatggcttgagcaccctggaggtcaagtga
DBGET
integrated database retrieval system
