Pseudomonas sp. SXM-1: DCC84_21540
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Entry
DCC84_21540 CDS
T11095
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00020
Citrate cycle (TCA cycle)
pssx00480
Glutathione metabolism
pssx00720
Other carbon fixation pathways
pssx01100
Metabolic pathways
pssx01110
Biosynthesis of secondary metabolites
pssx01120
Microbial metabolism in diverse environments
pssx01200
Carbon metabolism
pssx01210
2-Oxocarboxylic acid metabolism
pssx01230
Biosynthesis of amino acids
pssx04146
Peroxisome
Module
pssx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pssx_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DCC84_21540
09102 Energy metabolism
00720 Other carbon fixation pathways
DCC84_21540
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DCC84_21540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DCC84_21540
Enzymes [BR:
pssx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
DCC84_21540
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GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
QBQ12173
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Position
4554693..4556918
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAARILASFPEQLGAK
AVPDHLAELGDLAVTPEANIIKLPNISASTPQLQAAIKELQAQGYALPDYPETVTTDAEK
ETRARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMSTGD
FYGGEKAVQIEGADAVKIELIAKDGTATVLKEKTSVQAGEIIDTAVLSKKALRSFIAAEI
EDAKKQGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALAKHAVVLEQIGFNLNNGIGDL
YARIKALPADQQAQIEADIQAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKADGVVRVTDSKGNLLMEQAVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
NTPAIFWLDPQRAHDGVVVEKVQAYLKDHNTEGLDIRIMSPVDAMKFTLERTRKGLDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDTALQAQFGELAKTLTANEATIVAELNAVQGKPVDIGGYYAPNA
ELTSKAMRPSATLNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctacaccttcaccgacgaagccccagccctcgccacc
tattcactgctgcctatcgtagaggccttcaccgcttccgctgatattgccgtggaaacc
cgcgacatttccctggccgcgcgcatcctcgcaagcttccccgagcaactgggcgccaag
gccgtgccggaccacctcgccgaactgggcgacctggccgttacccctgaagccaacatc
atcaagctgccgaacatcagtgcctcgacccctcagctgcaagctgcgatcaaggaactg
caggcccagggctacgccctgccggactacccggaaaccgtaaccaccgacgcggaaaaa
gaaacccgtgcacgttacgacaaggtcaagggcagcgccgtgaacccggtactgcgcgaa
ggcaactccgaccgccgcgccccgctgtcggtcaagaactacgctcgcaagcacccgcac
aaaatgggcgcctgggctgccgactccaagtcccacgttgcccacatgagcaccggcgac
ttctacggcggcgagaaagccgttcagatcgaaggcgctgatgccgtcaagatcgaactg
atcgccaaggacggtactgctaccgtcctgaaggaaaaaaccagcgtacaagctggcgag
atcatcgacaccgccgtgctgagcaagaaagccctgcgcagcttcatcgccgctgaaatc
gaagacgccaagaaacaaggcgtgctgctgtcggttcacctgaaagccaccatgatgaag
gtttccgacccgatcatgttcggccagatcgttgccgagttctataaagacgcgctggcc
aagcacgctgtggtgctggagcagatcggcttcaacctgaacaacggcatcggcgacctg
tacgctcgcatcaaggccctgccggccgatcagcaagcgcagatcgaagccgacatccag
gcggtatacgctgctcgcccttccctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtcatcgtcgacgcatcgatgcctgccatgatccgtgactcc
ggcaagatgtggggcaccgacggccaactgcacgacaccaaggcggtgatcccggatcgc
tgctacgccactatctaccaggcagtgatcgaagactgcaaggccaatggcgccttcgac
ccaaccaccatgggcagcgtgccaaacgttggcctgatggcgaaaaaagccgaagagtac
ggctcccacgacaagaccttccagatcaaggctgacggcgtagtccgcgtcaccgacagc
aagggcaacctgctgatggaacaggctgttgaagccggcgacatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggccgtcaaccgcgcccgcgccagc
aacaccccggccatcttctggctggacccacagcgcgcgcacgacggcgtcgtggtcgag
aaagttcaggcttacctgaaagaccacaacaccgaaggcctggacatccgcatcatgtcg
ccagtcgacgcgatgaagttcaccctggagcgcacccgcaagggcctggacaccatctcg
gtgaccggcaacgttctgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtgccgctgatgaacggtggcggcctgttcgaaacc
ggcgctggcggctcggctccgaagcacgtgcagcaactggttgaagagaacttcctgcgc
tgggattccctgggcgagttcctcgccctggccgcatccctcgagcatttgggtgtgacg
tacaacaacccgaaagccctggtactgtccaagaccctggaccaggccaccggccagttc
ctcgacaacaacaagtcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctacctggcgctgtactgggctcaagccctggcggcccagaccgaagacactgcactg
caagcgcagtttggcgaactggccaagaccctgaccgcgaatgaggcaaccatcgttgcc
gagctcaacgctgtccagggcaagccagtggacatcggtggctactacgcaccgaacgcc
gagctgaccagcaaggccatgcgcccaagcgccaccctcaacgcggcaatcgctgcgctg
gtgtaa
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