KEGG   Pseudomonas sp. SXM-1: DCC84_21755
Entry
DCC84_21755       CDS       T11095                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DCC84_21755 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pssx02044]
    DCC84_21755 (tssI)
Secretion system [BR:pssx02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DCC84_21755 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: QBQ12215
LinkDB
Position
complement(4600865..4602907)
AA seq 680 aa
MFNTLVSSRFKLVVAGMNQAFQVLAFKGSETIDQPFFIEVQWVSENPSLDLEKLLHQPAY
LDFGEPGEGLHGQIYSIGREGPGQRLTRYHLTLAPRVAYLAHRCDQRIFQQRSVPQIIAA
VLEQHGILADAYTFELGPVVYPPRTFCVQYAETDLHFIQRLCEEEGIHYHFRHSADAHVL
VLGDDQTVFRRLPAQRYCPAGGPAAETLVIQRFDVRLATRSAQVVRRDYDFEHPSLRLQE
QAGSFPALEDYQYPAGFTGHLRGSQLARRGLERHQRDRHRALGRSDQPALRSGHFLELRG
HPDRTCNDLWLITGVRHEGYQPQVLEEAVVDVEAFHGYRNRFTATPWRAAYRPPLKHVKP
RISGSQTATVTGPEGEDVHCDAHGRVKIRFHWDRLDQHDDKSSCWVRVASGWAGDSYGAV
MIPRVGMEVLVTFLEGDPDRPVINGCLPNTLQPVAYPLPQHKTRSVLRSRSSPGGTGANE
LHLEDRSGQELIYLRAQRDLEQQVGHHSRLEVVGERRETIHGLSATTLGGEEHRSIAGDR
KVRLGADDHLHVQGNSQTLVGQTLVIEAGQQVHLKAGANLVIDAGAQLSFKAGGEHLLIQ
AGGIFSSRPITLGGVPDGTRTASPVGPGDVAAASAFAADGPKVSVIQGAVMELARRLDAD
FCPVCERCREGLCESTGRAA
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgttcaatacgcttgtttcgtcacgtttcaaactggtcgttgcaggaatgaaccaggca
tttcaggtgctggcttttaaaggcagcgaaacgattgaccagccttttttcattgaagtg
cagtgggtcagtgaaaaccccagcctggatctggagaagttacttcaccaaccggcctat
ctggattttggcgagcccggtgaaggcctgcacgggcaaatctacagcattggccgggaa
ggcccggggcagcggctgacccgctaccacctcacccttgcgccgcgcgtggcgtacctg
gcccatcgttgcgaccagcggattttccagcagcgcagcgtgccgcaaattatcgcggca
gtgcttgagcagcacggcatccttgctgatgcctataccttcgaactggggccggtggtt
tacccaccgcgtacgttctgtgtgcaatacgcggaaaccgacctgcactttatccagcgg
ctgtgcgaggaagagggcattcactaccactttcgccacagtgcagacgcccatgtactg
gtgttgggtgatgaccagacggtgtttcgtcgtttgccggcgcaacgctactgcccggcc
ggaggcccggctgccgaaacgctggtgatccagcgtttcgatgtgcgcctggccacgcgc
agtgctcaggttgttcggcgtgactacgacttcgaacatccgtcgctgcgcttacaggag
caggccggatctttcccggcacttgaagactatcaataccctgcgggattcacggggcat
ctgcgaggttcgcagttggcccggcgtggcctggaacgtcatcaacgcgaccgtcatcgg
gccctgggccgcagtgaccagccggctttgcgcagcgggcatttcctggaactgcgcggc
catccggaccgcacctgtaatgacttgtggctgatcaccggcgtgcgtcacgaaggctat
caaccgcaggtgctggaggaggcggtggtggatgtcgaggcattccacggctatcgcaat
cgatttaccgcaacgccctggcgcgccgcttaccgcccgccgctcaagcacgtcaaaccg
cgtatcagcggcagccagaccgcaaccgtcaccgggcccgagggtgaagacgtgcattgc
gacgctcacggccgggtgaaaattcgctttcattgggaccgcctggaccagcacgacgac
aagagcagctgctgggtgcgtgtggcgtccggatgggcgggtgacagctatggcgcggtg
atgatcccgcgtgtgggcatggaggtactggtgacgttcctggaaggtgatccagaccgg
ccagtgatcaatggttgcctgcccaataccttgcagcctgttgcctatccgttgccccaa
cacaagacccgcagtgtgctgcgcagccgcagttcgccgggcgggacgggggccaacgag
ctgcaccttgaggaccgcagcggccaggaactcatctacctgcgcgcccaacgcgatctg
gagcagcaggtcggccaccacagtcggctggaggtggtgggcgaacgtcgggaaaccatc
cacggcttgagtgccaccaccctgggaggcgaggaacaccgcagcatcgccggcgaccgc
aaggttcggcttggggctgatgatcacttgcacgtgcagggcaacagccagacccttgtc
ggccagaccctggtgatcgaagcggggcaacaggtccatttgaaggccggtgccaacctg
gttatcgatgccggtgcgcagttgagcttcaaggccggtggtgagcatttgctgattcag
gccggagggattttcagcagtcggccgatcacgttgggcggtgtgcctgacgggactcga
acagccagcccagttggaccgggtgacgtggctgctgcgtccgcatttgcagcggatggg
ccgaaggtttcggttatccagggcgcagtcatggagctggccagaagactggatgcggac
ttctgtccagtgtgcgagcgctgccgtgaaggcctgtgcgaatccaccgggagggcggct
tga

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