Pseudomonas sp. SXM-1: DCC84_23830
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Entry
DCC84_23830 CDS
T11095
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCC84_23830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_23830
Transporters [BR:
pssx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DCC84_23830
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
GST_C_4
Motif
Other DBs
NCBI-ProteinID:
QBQ12580
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All DBs
Position
5107871..5108938
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AA seq
355 aa
AA seq
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MKQLFLASLLGSTIAMCTAAMAADTDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWDDLA
KTYGLKHIDTDMSSAQEVAKFAAEKDNASADIGDVGAAFGPIAVKQGVTQPYKPTTWAQV
PDWAKDKDGNWALAYTGTIAFIVNKKLLHGSEAPKSWADLKTGKYKVSIGDVSTAAQAAN
GVLAAALANGGDEKNIQPALLMFADIAKQGRLSLANPTIATMEKGEVEVGVVWDFNGLSY
KAKMANPDDYVVLIPSDGSVISGYTTIINKYAKHPNAAKLTREYIFSDAGQTNLARGNAR
PIRAEHLTLPADVQAKLLPNEQYKKVTPIKDADAWEKTSKALPQKWQEEVIINMQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcttttcctggcatcactgttaggctcgaccattgccatgtgcaccgccgcc
atggccgctgataccgatctaaaaaccctggaagccgccgcgaaagcggaaggcgccgtc
aacagcgtcggcatgcccgatgactgggccaactggaaaggcacctgggacgacctggcc
aagacctacggcctcaagcacatcgacaccgacatgagctccgcccaggaagtcgccaag
tttgcggcagagaaagacaacgccagcgccgacatcggcgacgtgggtgcagccttcggc
ccgatcgcggtgaaacagggcgttacccaaccgtacaaaccgaccacctgggcacaagtc
ccggattgggcgaaagacaaggacggtaactgggccctggcctacaccggcaccatcgcc
tttatcgtcaacaaaaagctgttgcacggctccgaagctccgaaaagctgggctgacctg
aagaccggcaaatacaaggtttccatcggtgacgtgagcaccgccgcccaggcggccaac
ggcgtactcgccgccgcactggccaacggtggcgacgagaagaacattcagccggcgctg
ctgatgttcgccgacatcgccaagcaaggccgcctgtcgctggccaacccaaccatcgcc
accatggaaaaaggcgaagtggaagtgggcgtggtctgggacttcaacggcctgagctac
aaggccaagatggccaacccggatgactacgtggtgctgatcccatcggacggctcggtg
atttccggctacaccacgatcatcaacaaatacgccaagcacccgaacgccgccaagctg
acccgcgaatacatcttcagcgacgccggccaaaccaacctggcgcgtggcaatgcgcgg
ccgatccgtgccgagcacctgaccttgccagccgacgtacaggccaagctgctgcctaac
gagcagtacaagaaagtcacgccgatcaaggacgccgacgcttgggagaagacctccaag
gcactgccgcagaagtggcaggaagaagtcatcatcaatatgcaataa
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