Pseudomonas sp. SXM-1: DCC84_24455
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Entry
DCC84_24455 CDS
T11095
Name
(GenBank) multidrug transporter subunit MdtC
KO
K07789
multidrug efflux pump
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCC84_24455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_24455
Transporters [BR:
pssx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DCC84_24455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QBQ14713
LinkDB
All DBs
Position
complement(5233701..5236826)
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AA seq
1041 aa
AA seq
DB search
MNLSAPFVRRPIATTLMAAGLALFGALAFMLLPVAPLPEVDFPTISVSASLPGADPTTVA
SSVATPLERQFGQIAGVTQMTSSSSLGSARIILQFDLNRDIDGAARDVQAAINAARSNLP
SDLSGNPTYRKVNPADSPILIISLTSDSATPGQMYDVASTLLEQKLLQTTGVGDVTVGGG
ALPAVRVELNPDRLNQYGVSLEQVRQVINASNVNLPKGNVAIGDRNYGIAANDQLLDEKD
YGPLVVKAHNGDLIHIADLGYVREDVQDLRNFGLSNGKPAVLLVVFKQPGANVIETVDAV
KASLPFLQSSIPATIKLNLLMDRTTTIRASLHDVEITLLVSILLVTLVTFGFFRDWRSTL
VPAIVVPLSLLGTFGAMYFLGYSLNNLSLMALTISTGFVVDDAIVVVENIMRHLERGKTR
VEAALAGAQEVGFTVLTISVSLVAVFIPLLLMGGIVGRLFREFSVSLSVAIVISMLISLT
VTPMLASVLLRAPKAIHEGNEHPDSRFHRFYDRTLGWVIDHTVLMGFVTVLVIVLAGVLY
VLVPKGFFPQEDTGRLQGSILANQSISYGAMQKDFTEINRKVMKNPNIETVAGFVGGGGG
GGGAVNSAQMFVLLKPLGERKDNATEIIGQIRRSLGDLPGTKLYLQSAQDITVGGRQSGA
QYQYTLTADDQESLDEWVPKVVAVLRKLPQLTDLNTDQQDNSLLANVQINRDTAARLGVS
VSAVDQTLYDAFGQRQVATLYRAANQYHVVMEIAPEYWTDPSALKGIYVPTGTQATTTKG
TTAAPNLTTGQTLVPLSALADNTVARTAISISHQGTFPAVTVSFNLAPGTSIGQATAMVD
DAVKQLRMPASVVGQFAGTAQVFQSSVASEPLLIVAALLCVYIVLGILYENLTHPLTILS
TLPSAGVGALIALLLTGTELSIIALVGVILLIGIVKKNAIMMIDFAITERREFGLTAKEA
IRRACLIRFRPIMMTTLAAILGALPLVLGTGYGSELRRPLGISIIGGLLFSQVLTLYTTP
VIYLWLDRASQRLGRRKEARL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcagcgcgccgtttgttcgccgcccgattgcaaccaccttgatggcggccggc
ctcgcgctgtttggcgcgctggccttcatgctgttgccggtggcgccgttgccggaggtg
gatttcccgacgatcagcgtcagcgcctcgttgcccggcgccgatccgaccaccgtcgcc
agttcagtggccacgcccctggagcgccagttcgggcagatcgccggggtcacgcagatg
acctcatccagcagcttgggctcggcgcggatcattttgcagttcgacctgaatcgcgac
atcgacggcgccgcgcgggatgtgcaggcggcgattaatgccgcccgcagcaacctgccc
agcgacctgtccggcaacccgacgtaccgcaaggtcaacccggcggattcgccgattctg
atcatcagcctgacctccgacagcgccacgccggggcagatgtatgacgtggcctcgacc
ctgctggagcagaagttgttgcagaccaccggggtcggtgacgtgacggtgggcggcggc
gcgctgccggcggtgcgggtggaattgaaccccgatcggctcaaccagtacggcgtcagc
ctggagcaggtgcgccaggtgatcaacgcctccaacgtcaacttgcccaagggcaacgtg
gccatcggcgaccgtaactacggcattgcggcgaatgaccagttgctcgatgaaaaggac
tacgggccgctggtggtcaaggcccacaacggcgacctgatccatatcgccgacctgggc
tacgtgcgcgaagacgtgcaggacctgcgcaacttcggcctgtccaacggcaagccggcg
gtattgctggtggtgttcaagcagccgggggccaatgtgatcgagacggtggacgcggtg
aaggcctcgctgccgttcctgcaaagctcgattccggcgacgatcaagctcaacctgctg
atggaccgcaccaccactattcgcgcctcgttgcatgacgtcgagatcacgttgctggtg
tcgatcctgctagtgaccctggtgaccttcggcttcttccgcgactggcgcagcaccctg
gtgccggcgattgtggtgccgctgtcgctgctcggcaccttcggcgcgatgtacttcctc
ggctacagcctgaacaacctgtcactcatggcgctgacgatttccaccggctttgtggtg
gacgatgcgattgtggtggtggaaaacatcatgcgccacctggagcgcggcaagacccgg
gtggaagcggcgctggccggtgcccaggaagtcggcttcacggtactgaccatcagcgtg
tcgctggtggcggtgtttattccgctgctgctgatgggcgggattgtcgggcgcctgttc
cgcgagttttcggtgtcgttgtcggtggccattgtgatctcgatgctgatctcgctgacg
gttacaccgatgctcgccagcgtgctgctgcgtgcgccgaaagcgattcatgaaggcaat
gaacacccggactcgcgctttcaccgcttctacgatcgcaccctcggttgggtgatcgac
catacggtgctgatgggttttgtgacggtgttggtgatcgtgctcgccggcgtgttgtac
gtgctggtgcccaagggttttttcccccaggaagacaccgggcgcttgcagggcagcatc
ctggcgaaccagagcatttcctatggggcgatgcagaaggacttcaccgagatcaaccgc
aaggtgatgaaaaacccgaacatcgaaaccgtcgccgggtttgtcggcggtggcggaggg
ggcggcggggcggtcaacagcgcgcagatgtttgtattgctcaagcccttgggcgagcgc
aaggacaacgccaccgaaatcatcggccagatccgccgcagcctcggcgacttgccgggc
accaagctgtatttgcagtcggcccaggacatcaccgtgggtggccggcaaagtggcgcg
caataccaatacaccctgaccgccgatgaccaggagtcgctggacgaatgggtgcccaag
gtggtggcggtgctgcgcaaattgccgcaactcaccgacctcaataccgaccagcaagac
aacagcttgctggccaatgtgcaaatcaaccgggacacggcggcgcgcctcggggtgagt
gtctcggcggtcgaccagacgctgtacgacgcctttggccagcgccaggtcgcgactctg
tatcgcgcggccaaccagtaccacgtggtgatggaaatcgcgccggaatactggaccgac
ccttccgcgctcaagggcatttatgtgccgacgggcacccaggccacgaccaccaagggc
accacggcggcgcccaacctgaccaccgggcagaccctggtgccactctcggcactggcg
gataacacggtggcgcgcactgcaatttccatcagtcaccagggcacgttcccggcggtg
acagtctcgttcaacctggcgcccggcacgtccatcggccaggccacggcgatggtggac
gatgcggtgaagcaactgcgcatgcccgccagtgtggtcggccagtttgccggtacggcc
caggtgttccagtcgtcggtggccagtgagccgctgctgatcgtcgctgcgttgctgtgc
gtgtatatcgtgctgggcatcctctacgaaaacctgacgcacccgctgaccattctttcg
accctgccctcggccggcgtcggtgcgttgatcgccttgctgctgaccggcaccgagctg
tcgatcattgcgctggtgggggtgattctgttgattggtatcgtgaagaaaaacgcgatc
atgatgatcgacttcgcgatcaccgagcggcgggagttcggcctcacggccaaggaagcg
attcgccgagcgtgcctgatccgtttccggccgatcatgatgaccaccctggcggcgatc
cttggcgcgctgccgctggtgctcggcaccggttatggctctgagttgcgccggccgttg
gggatttcgattattggtggcctgctgttcagccaggtgctgacgctgtacaccaccccg
gtgatctacctgtggctcgaccgggcgtcacagcgcctgggtcggcgtaaggaagcaagg
ttatga
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