Pseudomonas sp. SXM-1: DCC84_24755
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Entry
DCC84_24755 CDS
T11095
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02020
Two-component system
pssx02025
Biofilm formation - Pseudomonas aeruginosa
pssx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCC84_24755
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_24755
09142 Cell motility
02040 Flagellar assembly
DCC84_24755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pssx03021
]
DCC84_24755
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pssx02035
]
DCC84_24755
Transcription machinery [BR:
pssx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCC84_24755
Bacterial motility proteins [BR:
pssx02035
]
Flagellar system
Flagellar assembly proteins
Stator
DCC84_24755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QBQ12736
LinkDB
All DBs
Position
complement(5293998..5294738)
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYNLYKKSARDSQVELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRSIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHLEPSRDLEDE
RFQSALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagcggctacaacctttacaagaagtcggcacgtgacagtcaagtcgaattg
atcgagcgctatgcgcccctggtcaagcgcattgcctatcacctgctggcgcgcttgcct
gccagcgtgcaggtcgaagacttgatccaggccgggatgatcggcctgcttgaagtgtcg
accaagtacgacgcgagcaagggcgcgagtttcgagacatacgcgggtatccgtatccgt
ggggccatgctcgatgaagtgcgtaaaggtgattgggcgccgcgatcagtgcaccgcaat
acgcggatggtgagtgacgcaattcgctcaattgaagcaaaaaccggtcgcgacgctaaa
gatcatgaagttgcggccgaactccaattgagtctcgacgattactacgggattttgaac
gataccttgggcagccggctgttcagtttcgacgaccttttacaggatggcgaacatgaa
gggctgcacgaggacggcgcgagtgcccatctcgaaccgtcacgggacctggaagatgaa
cgcttccagagcgcgctggcggacgcgatagccaatttgccggagcgtgagcgactggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgggtcagccagttacacagccagtgcgcggcccgcttgcgggggcgtttg
ggagagtggcgagcgcgctga
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integrated database retrieval system
