Pseudomonas sp. SXM-1: DCC84_24885
Help
Entry
DCC84_24885 CDS
T11095
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx02020
Two-component system
pssx02025
Biofilm formation - Pseudomonas aeruginosa
pssx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCC84_24885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
DCC84_24885
09142 Cell motility
02040 Flagellar assembly
DCC84_24885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssx03000
]
DCC84_24885
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pssx02035
]
DCC84_24885
Transcription factors [BR:
pssx03000
]
Prokaryotic type
Helix-turn-helix
Other families
DCC84_24885
Bacterial motility proteins [BR:
pssx02035
]
Flagellar system
Flagellar assembly proteins
Others
DCC84_24885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
bpMoxR
GAAD
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QBQ12761
LinkDB
All DBs
Position
complement(5318031..5319506)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPD
FGSTAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRKEGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcggcgccgcgatctg
gcggtgatcctgaattttcttggcgaagaaaatctaccctgtggcagccacgactggcag
caggcggtcagctctttgtcgtcgagccgcgaagtcatttgtgtgctgatcgggacggta
aacgctcctggtgcagttctgggcttgttaaagacactgtcgacctgggatgagttcctt
ccggtgttgctgatgggcgatatttcttccgtggaccttccggaagaccagcgccgccgc
gtgctttccaccctcgaaatgccccccagctacagcaaattgctcgactccctgcaccgt
gcccaggtctaccgcgagatgtacgaccaggcccgcgagcgcggccgtcaccgcgaaccc
aacctgttccgcagcctcgtcggcaccagtcgtgcgatccagcacgtgcgccagatgatg
cagcaagtggccgacaccgacgccagtgtgctgatcctcggcgagtcgggcaccggcaag
gaagtggtcgcacgcaacctgcattaccattccaagcgtcgtgacgggccgttcgtgccg
gtcaactgcggggcgatcccggcagaactgctggaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgttttgaactggccaacggcggc
accctgttcctcgacgaaatcggcgacatgccgctgccgatgcaggtcaagctgctgcgg
gtattgcaggagcgcaccttcgagcgcgtgggcagcaacaagacccagagcgtcgacgta
cgcatcatcgcggccacccacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcctcaacgtattcccgatcgaaatggcgcccctgcgcgagcgc
gtcgaagacatcccgctgctgatgaacgaactgatctcgcgcatggaacacgaaaagcgt
ggttcgattcgcttcaactcggcggcgatcatgtcactgtgtcgccacggctggccgggc
aacgtccgcgagttggccaacctggtggagcgcatggcgatcatgcacccgtacggggtg
atcggcgtggtcgagctgccgaagaaattccgctacgtcgacgacgaagacgagcaattg
gtggacagcctgcgcagcgacctggaagagcgcgtggccatcaacggccacacgccggac
ttcggctccaccgccatgctgccgccggaaggcctggacttgaaggactacctcggcagc
ctcgaacaaggcctgatccagcaggcactcgacgacgccaacggtatcgtcgcccgtgcc
gccgagcgcctgcgcatccgacgtaccaccctggtggagaagatgcgcaagtacggcatg
agtcgcaaggaaggtgatgaacaggcggatgattga
DBGET
integrated database retrieval system
