Pseudomonas sp. SXM-1: DCC84_26180
Help
Entry
DCC84_26180 CDS
T11095
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pssx03000
]
DCC84_26180
Transcription factors [BR:
pssx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DCC84_26180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_22
TetR_C_6
HTH_36
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
QBQ13004
LinkDB
All DBs
Position
5558246..5558866
Genome browser
AA seq
206 aa
AA seq
DB search
MTVPLRLTDRKREAIVAAAIAEFRDNGFEVTSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILHQLWASSVAQLDVSYASDRPLREQLRGLLQAKMTMMSDANFLDLARVAIAATIHSPER
AQDMVNRLSKREEGFTQWVRAAQEDGRLSCTDPCFAAHQVQSLLKAFAFWPQITLGQPTL
DADAQANVIESAIDLFLAGYEVVPQH
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacccctgcgcctcaccgaccgtaaacgcgaagccatcgtggcagccgccatt
gccgagtttcgtgacaacgggttcgaggtcaccagcatggacaagattgcggccacggcg
ggggtttccaagcgcacggtgtacaaccatttcccgagcaaggaagagctgttcgccgag
atcctgcatcaactgtgggccagcagtgttgcgcaactggacgtcagctacgccagcgac
cgcccgctgcgggagcaactgcgcgggttgctgcaggccaagatgacgatgatgtcggac
gccaacttcctcgacctggcccgggtcgcgattgccgccaccatccactcgccggaacgt
gcccaggacatggtcaaccgcctgagcaagcgtgaagaaggcttcacccaatgggtgcgc
gccgcccaggaagacggccggctgagctgcaccgacccatgcttcgccgcccaccaggtg
caaagcctgctcaaggcctttgccttctggccacagatcaccctcggccagccgaccctg
gacgccgacgcccaagcgaacgtcatcgagtcagccatcgacctgttcctcgcaggctat
gaggtcgtgccgcagcactga
DBGET
integrated database retrieval system
