Pseudomonas sp. SXM-1: DCC84_26690
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Entry
DCC84_26690 CDS
T11095
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pssx03009
]
DCC84_26690
Enzymes [BR:
pssx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DCC84_26690
Ribosome biogenesis [BR:
pssx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DCC84_26690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF776
Motif
Other DBs
NCBI-ProteinID:
QBQ13102
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Position
complement(5655670..5656917)
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AA seq
415 aa
AA seq
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MSDQDQNDTQEIGPAGEKLQKVLARIGVGSRRDVEAWITQKRIKVNGVEATLGQRVDLHD
AITIDGKVIKREEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPRPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAR
FTDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDILSAEVGLTPVAMPQMNAKSKDKLERMQRKSSRPVARTDRVARTLRPAL
DAPATGGRISREPHIEGERRPSAPPRQDGERAPRAPRPAGRGDAPAGGRGNRGESGRGAP
AAGRADDSASTKRPAKPSPKKRPGLKLVDDAPSGKRRGAPAGSGQRPGFGRKKPQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagaccagaacgacacccaggaaatcggccccgcaggtgaaaaactgcag
aaagtcctcgcccgtatcggcgtaggctcgcgccgcgacgtagaagcctggatcacccag
aagcgcatcaaggtcaacggcgttgaagccacccttggccagcgcgtcgacctgcacgat
gccatcaccattgatggcaaggtcatcaagcgtgaagaggccgccgaatcggtgcgccgc
gtcatcatgtacaacaagcctgatggcgaaatctgcacccgtgacgacccggaaggccgt
ccaaccgtattcgacaagatgccgcgccccaaagaaggccgctggatcaacatcggtcgt
ctcgacatcaacaccaccggcttgctgatgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccttcctacgagatggaccgtgaatacgcggtacgtgtgcgtggtgaagtc
gatgacgaaatgatcgagcgcttgaaagccggcgtcgtgctggaagacggcccggccagg
ttcaccgacatcaagcaggcgccgggcggcgaaggcttcaaccattggtaccactgcgtg
gtgatggaaggccgtaaccgtgaagtacgtcgcctgtgggaatcccagggcctggtggtc
agccgcctgaagcgcgtgcgtttcggcccggtgttcctcaactccgacctgccgatgggc
cgctggcgcgaaatgagccagtacgaagtcgacatcctcagtgccgaagtcggcctgacg
ccggtggccatgccgcagatgaacgccaagagcaaagacaagcttgagcgtatgcagcgt
aaatcgtcgcgtccggtggcgcgtaccgaccgtgttgcccgcaccctgcgccctgcgctg
gatgcaccggccacgggcggccgcatctcccgcgagccgcacatcgaaggcgagcgtcgt
ccttcggcaccgccccgtcaggatggcgaacgtgcgccgcgcgcaccgcgtccagccggt
cgtggtgatgcacctgctggcggtcgcggtaaccgtggcgagtctggtcgtggtgctccg
gctgcgggccgtgccgacgacagcgccagcaccaaacgtccagccaagccatcgccgaaa
aagcgcccgggcctgaagctggtcgatgacgcgccatcgggcaagcgtcgtggtgcaccg
gccggttccggccagcgtccaggttttggtcgcaagaagccgcagtga
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