Pseudomonas sp. SXM-1: DCC84_26940
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Entry
DCC84_26940 CDS
T11095
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC84_26940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_26940 (ruvB)
Enzymes [BR:
pssx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC84_26940 (ruvB)
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC84_26940 (ruvB)
RecFOR pathway proteins
DCC84_26940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
TIP49
AAA_14
nSTAND3
AAA_17
RNA_helicase
AAA_2
Rad17
AAA_28
ABC_tran
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
SAM_Ribosomal_mS41
RsgA_GTPase
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QBQ13145
LinkDB
All DBs
Position
complement(5704453..5705511)
Genome browser
AA seq
352 aa
AA seq
DB search
MIEADRLIAATGPRDREEIQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYSTADLATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAK
GHITKPVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMPVVDEFLDAVDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagctgatcgtctgatcgcggccaccgggcctcgtgatcgtgaagaaatccag
gaccgggcgattcgccccctgagccttgccgaatacatcggccagcccaccgtgcgcgag
cagatggagctgttcatccaggccgcgcgcgggcgcagcgagtccctggaccacacgttg
atcttcggcccgcccgggctcggcaagaccaccctggctaacatcatcgcccaggaaatg
ggcgtgtcgatcaagtccacctccggccccgtgctggagcgcccgggcgacctggcggcg
ctgctgaccaacctggagccccacgacgtactgtttatcgacgagatccaccggctttcg
cccatcgtcgaggaagtactgtacccggccatggaagacttccagctggacatcatgatc
ggtgaaggcccggcggcgcgctcgatcaagctcgacctgccaccgttcacgctggtgggt
gcgaccacccgtgcgggcatgctgaccaacccgctgcgagaccgtttcgggattgttcaa
cgtctagagttctatagcacggcggatctggccaccatcgtcagccgttcggcgagcatc
ctgggcttgcccctggacccggaaggcgcctttgaaatcgcccgccgcgcccgtggtacc
ccgcggattgccaaccgtctgctgcgccgggtgcgcgactttgccgaagtgcgggccaag
gggcatatcaccaagcccgtggcagacctggcgctgaacctgctggatgtggatgagcat
ggctttgatcaccaggaccggcgcctgctgttgaccatgatcgagaagttcgacggcggc
ccggtgggcgtggacagcctcgccgccgccatcagcgaagagcggcatacgattgaggat
gtactggagccgtatctgattcagcagggctacatcatgcgcacgccaagggggcgtgtg
gtcacccggcatgcgtatctgcactttgggttaaacattccgtcacgattgggcgagatg
cccgtagtagacgaattcctcgatgcagtagacgattaa
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