Pseudomonas sp. SXM-1: DCC84_27060
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Entry
DCC84_27060 CDS
T11095
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pssx Pseudomonas sp. SXM-1
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_27060
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DCC84_27060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
FtsK_SpoIIIE
ResIII
nSTAND_NTPase5
TrwB_AAD_bind
AAA_30
AAA_10
T2SSE
AAA_7
CbiA
AAA_19
SRP54
nSTAND3
AAA_6
Hydrolase
P-loop_TraG
AAA_28
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QBQ13167
LinkDB
All DBs
Position
complement(5726539..5728017)
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AA seq
492 aa
AA seq
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MPDSSQLIIGADLQGQPIAQSMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAANPQGKVAERIAGMPFLNYTPKAYPVTLWDIHGQSGHPLRTTMSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLRYHPELLGEDAALMTI
GSSQALLRRLAVLEQQGAEALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFADTPKALQDRLEQVVRLIRSKGVG
VYFVTQSPGDLPDTVLAQLGLRIQHGLRAFTTKEQKSLRAVADGFRPNPAFDALAVLTEL
GTGEALVGTLQEKGTPEVVQRVLVAPPQSRIGPLSEAERAALIASSPLQGRYDKPIDRES
AYEVLMARKDLGPQEDSTPAAEEPSFTDKAGAFLGTTAGKALKSAMQQAANQMGRQLVRG
LLGSLLGGSKRK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcctcgcaactcattattggtgcagatcttcagggccagccgattgcccag
tcgatgcgcctggccaaccgccacggcctgatcgcaggcgccaccggcaccggcaagacc
gtgaccttgcagcgcctggcggaagctttcagcgacgccggggtcgcggtatttgccgcc
gatatcaagggtgacctgtgtggcctgggcgctgcggccaaccctcagggcaaggtcgcc
gagcgcatagccggcatgcctttccttaattacacgcccaaggcgtatccggtgacgttg
tgggatatccacggccagtccggtcatccgttgcgcaccaccatgagtgaaatgggcccg
ctgttgctcggcagcctgttggagctcaccgacagccagcaatcggccctctacgcagcc
ttcaaggtggccgatcgtgaaggcctgttgttgctggacctcaaggacctcaaggcgctg
ctgaaccatttgcgctatcacccggagttgctcggggaagacgcggccttgatgaccatc
ggttccagccaggcgctgttgcggcgcctggcggtgctggagcagcagggtgccgaagcg
ttgttcggcgagccggcgctgcaactcgaagacatcctgcaaccggccagtgacggccgc
gggcgtattcatctattggacgccagccggctggtgcatgaggcgccgaaggtctacgcg
accttcctgctttggctgttggccgaactgttcgagcaactgccggaacgtggcgatgcc
gacaagccgctgctggcgctgtttttcgatgaggcgcatctgttgtttgccgacaccccc
aaggccctgcaggatcgcctggagcaagtggtgcggctgattcgctcgaaaggcgtcggt
gtgtatttcgtcacccagtctcccggggacttgccggacaccgtgctggcgcaactcggc
ttgcgcatccagcacgggctgcgggcgttcaccaccaaggagcagaagtccctgcgggcg
gtggccgatggtttccggcccaatccggcatttgatgcgctggcggtgctgaccgagttg
ggtacaggtgaggcattggtgggaaccttgcaggaaaaggggacgcctgaagtagtccaa
cgcgtactggtagcaccgccgcaatcgcggatcgggccactgagcgaagctgagcgggca
gcactgattgccagttcgccattgcaggggcgctatgacaagccgattgaccgtgagtcg
gcgtacgaagtgttgatggcgcgcaaggacttgggcccgcaagaggattcgacgcccgcc
gctgaagagccaagctttaccgacaaggccggtgctttcctcggtactacggcaggcaag
gcactgaaatcggcgatgcaacaggcggccaatcagatgggccggcagttggtgcgcggg
ttactggggtctttgttaggcggcagcaaacgtaaataa
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