KEGG   Pseudomonas sp. SXM-1: DCC84_29780
Entry
DCC84_29780       CDS       T11095                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pssx  Pseudomonas sp. SXM-1
Pathway
pssx03030  DNA replication
pssx03430  Mismatch repair
pssx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pssx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DCC84_29780
   03430 Mismatch repair
    DCC84_29780
   03440 Homologous recombination
    DCC84_29780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pssx03032]
    DCC84_29780
   03400 DNA repair and recombination proteins [BR:pssx03400]
    DCC84_29780
Enzymes [BR:pssx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DCC84_29780
DNA replication proteins [BR:pssx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DCC84_29780
DNA repair and recombination proteins [BR:pssx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DCC84_29780
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2
Other DBs
NCBI-ProteinID: QBQ13676
LinkDB
Position
complement(6305587..6306198)
AA seq 203 aa
MERIAVIDFETTGIQPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLTSFAQLPHTGKAHRAMADAEMAANLTAHLAEELRRTHGLRELSHE
LLCSLQKVPAAKINDHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatccagccgagcagcagctgc
cgggccacggaaatcgccgtggtcatcctggagcagggccagatcgtggaccgctaccag
agcctgatgaacgctggtgtgcgtgtgccggggtttatcgagcaactgaccggcatcagc
aacgccatgctgcgcaccgcaccgtcggcggagcgggtgatgaacgaggtgaacgagttt
gtcggcaccacgccgctgctggcccacaacgccgcgtttgaccagaagttctgggatttc
gagctggggttgatccggcgtacgcgtttgcagaagtttgcctgttcgctattgctggcg
cgacgcttgatgccggcggcgccgaaccacaagctgggtaccctgacctcgtttgcccaa
ctgccccacaccggcaaggctcaccgggcgatggcggacgcggagatggcggcgaacctt
accgctcacctggccgaggaactgcgtcgcacccacgggttgcgggagttgtcacacgaa
ttgctgtgcagcttgcagaaggttccggcggcgaagatcaatgatcatctgaagaagcat
cgcgggttctaa

DBGET integrated database retrieval system