Pseudomonas sp. SXM-1: DCC84_29780
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Entry
DCC84_29780 CDS
T11095
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx03030
DNA replication
pssx03430
Mismatch repair
pssx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCC84_29780
03430 Mismatch repair
DCC84_29780
03440 Homologous recombination
DCC84_29780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pssx03032
]
DCC84_29780
03400 DNA repair and recombination proteins [BR:
pssx03400
]
DCC84_29780
Enzymes [BR:
pssx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCC84_29780
DNA replication proteins [BR:
pssx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCC84_29780
DNA repair and recombination proteins [BR:
pssx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCC84_29780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QBQ13676
LinkDB
All DBs
Position
complement(6305587..6306198)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGIQPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLTSFAQLPHTGKAHRAMADAEMAANLTAHLAEELRRTHGLRELSHE
LLCSLQKVPAAKINDHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatccagccgagcagcagctgc
cgggccacggaaatcgccgtggtcatcctggagcagggccagatcgtggaccgctaccag
agcctgatgaacgctggtgtgcgtgtgccggggtttatcgagcaactgaccggcatcagc
aacgccatgctgcgcaccgcaccgtcggcggagcgggtgatgaacgaggtgaacgagttt
gtcggcaccacgccgctgctggcccacaacgccgcgtttgaccagaagttctgggatttc
gagctggggttgatccggcgtacgcgtttgcagaagtttgcctgttcgctattgctggcg
cgacgcttgatgccggcggcgccgaaccacaagctgggtaccctgacctcgtttgcccaa
ctgccccacaccggcaaggctcaccgggcgatggcggacgcggagatggcggcgaacctt
accgctcacctggccgaggaactgcgtcgcacccacgggttgcgggagttgtcacacgaa
ttgctgtgcagcttgcagaaggttccggcggcgaagatcaatgatcatctgaagaagcat
cgcgggttctaa
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