Pseudomonas sp. SXM-1: DCC84_30230
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Entry
DCC84_30230 CDS
T11095
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx00900
Terpenoid backbone biosynthesis
pssx01100
Metabolic pathways
pssx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DCC84_30230 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pssx01006
]
DCC84_30230 (ispA)
Enzymes [BR:
pssx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DCC84_30230 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DCC84_30230 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
DCC84_30230 (ispA)
Prenyltransferases [BR:
pssx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DCC84_30230 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QBQ13763
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All DBs
Position
6406079..6406966
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AA seq
295 aa
AA seq
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MIDAYQAGSQARVNAALEPLFVAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGA
QAEEANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSSVNAEIRLRMVTALALAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHK
TGALIEAAVHLGALASGRAEAAQLAALQTYARAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPSLLGLEAAKAYALELRDQALDALRPFDAAAEPLRDLARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcttatcaggccggcagccaggcccgggtcaatgctgcgctggaaccgctg
tttgtcgcgcccagccctgagctgaaccgcctgtatgaggccatgcgctacagcgtgatg
aacggtggcaagcgggttcgcccgttgctcgcctatgcggcctgtgaagccctcggcgcc
caggcggaggaagccaacggcgccgcctgtgcggtggagttgatccacgcttactccctg
gtacacgacgatttgccggcaatggacgacgacgatctgcgtcgcggccagcccactacc
cataaagcctttgatgaagcctgcgcgattctcgccggtgacggcctgcaaagcctggcg
ttcagcgccttgctggacccgcgcctgagcagcgtcaacgccgagatccgtctgcgcatg
gttaccgcgctggcgctggccgcagggcctgccggcatggtcggcggccaggcgattgac
ctgggctcggtcggtttgaagctcgatcaacaagccctggaatacatgcaccgccacaag
accggcgcgctgatcgaggccgccgtgcacctcggcgccctggccagtggccgtgccgaa
gctgcgcaactggcggcgctgcaaacctacgcgcgggccatcggcctggcgttccaggtg
caggacgatattctcgacgttgaaagcgataccgcgaccctcggcaagcgccagggtgct
gatatcgcacgggacaagccgacttatccttcgcttcttgggctggaagccgccaaggcg
tacgccctggagctgcgggaccaggccctggatgccctgcgacctttcgacgcggctgcc
gagccactgcgtgacctggcgcggtatatcgtcgaacgtcgccactga
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